Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02852 ATGGAGCTTGCGATGTTAAACTCCAGATCTGTCTCTTCTTTCTTATTGGCATTTTGGCTTTTCACTTTGTTCACAGATTTTCCATCAAATAAAGCTCAACTTATTCCCCACCATGAAGTGAAGGCTCTACAGGCCATTTCTGATAAGCTCACAAACGTGAACTGGAAGGTCACACAAACGTCTTGTAAGAGTGGAGAAGGATTTCGTTCTTCCAATACTTCACCTATATCAGTCAGAAACGTCACTTGTGATTGCACTTCCCAAAACGGCACCGTTTGCCATGTTACTGGCATTCGGTTGACAGGCCAGAGCATATCTGGAGAAATACCCAGTGAATTTGGAAATCTCACCCAACTGACTCTACTTGATCTCACTCGCAACTATCTCAATGGCACAATTCCCAGGTCTTTTGCGCGCATTCCTCTTGTCACTTTGTCCCTTTCTGGGAATCGCATTAGTGGTTCGATTCCTGAAGAATTCGGTGAAATTGCAAGTCTGGAGAATCTGGGTTTAGAAGATACTCAGCTTACAGGACCTCTTCCTCAGAGTTTTGGAAATTTGAGCACCTTACGAAGAGTATTTCTTTCTGCAAATAGTTTTACGGGGACAATTCCAGAAACTTTTGGGAATCTGAAGAACCTTATACTTTTTTTCATGAACGGGAACAACTTATCAGGGAAGATGCCAAGTTTTATTGGGCATTGGACTGAAATTAGTTATCTGGATATGCAAGGCACAGGCGTCGAAGGTCCAATTCCTCCCACCATATCGTGGTTGACAAATTTGAAAGAATTGGTAATATCTGACTTGAGAGGAACAACAACTATGGCATTTCCTAATTTGAAGAATATGAAGAGTTTGGAACGACTGATATTGAGAAATTGCTTAATTAATGGTCCCATTCCAGAGTATATTGGCGAAATGAAAAACCTAATTACCTTAGACCTGAGCTTTAACAAGTTGACTGGTTTAATCCCTGACTCACTTCAGAGCTTAAATTTTAATTACATGTTTCTGACAAACAATTCTCTTAGTGGAGCAATTCCTAAATGGGTGCTGAAGAACAAAAATAATATTGATCTATCTTACAATAATTTTGCTGAGGCTTCTACACGGAGTTGCCAGATCTTACAAGTGAACTTAGCTTCCAGTCTTTCATCTTCAGTAAGAAATGCAGCCTTTTGCCTAAAGAAGGGTCTACCTTGTCCAGGAAAACCTCAGTATTATTCGTTGTTCATAAACTGTGGAGGACCTAAGATGGAGTTTGAGGGGAATGAATATGAAGAAGATCTCAATCAAGATGGCATTTCATACTTTTATGAAAAAGAAAAATGGGCTTATAGCAGCACAGGAACATATATGTATAGTGATAATGCTAATTATATAGCAAGTCTAGAAACAAATAAGTTTTCTTTGACTGTTAATGGCTCAGAATACTACAAAACAGCTCGCCTCAGCCCTCAATCACTTAAATACTATGGCCAATGTATGATGAAGGGTAATTATAAGGTGAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGACATTTAGCAGCCTTGGAACACGCATATTTGATGTTTCAATTCAAGGTATTAAATACTTGAAAGATTTTAATATTGCAAAGGAAGCTGGTGGAGTTGGTAAGGGTATCACAAAGGAATTCGATGTCGATGTGAACGATAGCACCTTGGAGATTCATCTATACTGGGCAGGGAAAGGTACTACTACAATTCCCAACAGAGGTGTATATGGACCTCTAATATCTGCCATTACAGTGGCCCCAAACTTCAAACTTCCTTCAAAACGGTTGCCTGTTGGAGTTATTGTTGGAATTGTGGTTGGATCGTGTGCCTTTATTGTACTTGTACTCATTGGCCTCCAAAAGAAGGGTTTCCTTTGTGGGAAATATTCAGAGGACATAGTACTTTCAGATCTTAAAACATGTCATTTTTCTTTAAGACAAATTAAAACTGCAACCAATGACTTTGACCCTGCAAATAAGATAGGAGAAGGTGGCTTTGGGCCTGTGTATAAGGGTGTGTTGTCTGATGGTGTCGCCATTGCTATTAAGCAACTCTCTTCCAAGTCAAGGCAAGGAAATCGGGAATTTGTTAATGAAATAGGAATGATATCTGCTCTGAAACATCCAAATCTTGTGAAACTTTATGGTTGTTGCATTGAAGGAAATCAATTGTTGCTTATATATGAATACATGGAGAACAATTGTCTTGCCCAGGCACTATTTGGCCACGAAGAACAAAGGACGCTATTGGACTGGCCCACAAGAATGAAGATTTGCCAAGGAATAGCAAGGGGATTAGCTTATCTTCATGAAGAGTCAAGATTGAAAATAGTACATAGAGACATTAAGGCAACAAACATCTTACTTGATAAATATCTGAATGCTAAAATCTCTGATTTTGGTTTAGCAAAACTTGATGAAAAAGCGGAGTCTCACATTGACACTCGAATAGTTGGAACAATCGGTTACATGGCTCCTGAATATGCAATGAAAGGTTACTTGACAGATAAAGCGGATGTTTATAGCTTTGGAGTCGTTGCTTTAGAGATTGTCAGTGGAAAGAGCAATGCTAGTTACATGGCAATGGATGAGAATGTTTATCTTCTTGATTGGGCCTCTGTTCTCCAAGAACAAGGAAAGCTTCTGGAATTGGTGGATCTTCGTCTTGGTTCAAGATATTGTCAAGATGAGGTCATGAGAATGCTCAACTTAGCTCTCTTGTGCACCAATCCATCTCCCACCCGTCGACCCTGCATGTCATCTGTAGTGAGCATGCTTGAAGGAAGAACTCCAATCCAAGTACCATTAATCAAGCAGAAAGGTTCAAGACAGGATCAAGATGCAGTTTTCAAAGCCTCTGGGATGCTATCGTTATCATATGATAGCCAGACATCTATAGTCTCTCAAGCAAGTGCCATGGAACAAGGAGGAAAGTCAATGGATGGGTCATGTGTTGACTCCTCAACATCTCTTTCAAGTAGCTAG 3015 0.3964 MELAMLNSRSVSSFLLAFWLFTLFTDFPSNKAQLIPHHEVKALQAISDKLTNVNWKVTQTSCKSGEGFRSSNTSPISVRNVTCDCTSQNGTVCHVTGIRLTGQSISGEIPSEFGNLTQLTLLDLTRNYLNGTIPRSFARIPLVTLSLSGNRISGSIPEEFGEIASLENLGLEDTQLTGPLPQSFGNLSTLRRVFLSANSFTGTIPETFGNLKNLILFFMNGNNLSGKMPSFIGHWTEISYLDMQGTGVEGPIPPTISWLTNLKELVISDLRGTTTMAFPNLKNMKSLERLILRNCLINGPIPEYIGEMKNLITLDLSFNKLTGLIPDSLQSLNFNYMFLTNNSLSGAIPKWVLKNKNNIDLSYNNFAEASTRSCQILQVNLASSLSSSVRNAAFCLKKGLPCPGKPQYYSLFINCGGPKMEFEGNEYEEDLNQDGISYFYEKEKWAYSSTGTYMYSDNANYIASLETNKFSLTVNGSEYYKTARLSPQSLKYYGQCMMKGNYKVKLHFAEIMFSDDQTFSSLGTRIFDVSIQGIKYLKDFNIAKEAGGVGKGITKEFDVDVNDSTLEIHLYWAGKGTTTIPNRGVYGPLISAITVAPNFKLPSKRLPVGVIVGIVVGSCAFIVLVLIGLQKKGFLCGKYSEDIVLSDLKTCHFSLRQIKTATNDFDPANKIGEGGFGPVYKGVLSDGVAIAIKQLSSKSRQGNREFVNEIGMISALKHPNLVKLYGCCIEGNQLLLIYEYMENNCLAQALFGHEEQRTLLDWPTRMKICQGIARGLAYLHEESRLKIVHRDIKATNILLDKYLNAKISDFGLAKLDEKAESHIDTRIVGTIGYMAPEYAMKGYLTDKADVYSFGVVALEIVSGKSNASYMAMDENVYLLDWASVLQEQGKLLELVDLRLGSRYCQDEVMRMLNLALLCTNPSPTRRPCMSSVVSMLEGRTPIQVPLIKQKGSRQDQDAVFKASGMLSLSYDSQTSIVSQASAMEQGGKSMDGSCVDSSTSLSSS 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02852 1004 ProSiteProfiles Protein kinase domain profile. 665 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02852 1004 Pfam Protein tyrosine and serine/threonine kinase 669 936 IPR001245 GO:0004672|GO:0006468
Accr1g02852 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Accr1g02852 1004 Pfam Leucine Rich Repeat 310 332 IPR001611 GO:0005515
Accr1g02852 1004 SUPERFAMILY L domain-like 85 367 - -
Accr1g02852 1004 FunFam Putative LRR receptor-like serine/threonine-protein kinase 741 948 - -
Accr1g02852 1004 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Accr1g02852 1004 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 39 203 - -
Accr1g02852 1004 Gene3D Ribonuclease Inhibitor 275 397 IPR032675 -
Accr1g02852 1004 Gene3D Phosphorylase Kinase; domain 1 635 740 - -
Accr1g02852 1004 Gene3D Transferase(Phosphotransferase) domain 1 741 945 - -
Accr1g02852 1004 MobiDBLite consensus disorder prediction 981 1004 - -
Accr1g02852 1004 Gene3D Ribonuclease Inhibitor 38 203 IPR032675 -
Accr1g02852 1004 Gene3D Ribonuclease Inhibitor 204 274 IPR032675 -
Accr1g02852 1004 CDD STKc_IRAK 671 938 - -
Accr1g02852 1004 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 636 740 - -
Accr1g02852 1004 SUPERFAMILY Protein kinase-like (PK-like) 650 945 IPR011009 -
Accr1g02852 1004 Pfam Malectin domain 410 593 IPR021720 -
Accr1g02852 1004 Gene3D - 407 598 - -
Accr1g02852 1004 SMART serkin_6 665 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02852 1004 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 20 962 - -
Accr1g02852 1004 ProSiteProfiles Leucine-rich repeat profile. 310 331 IPR001611 GO:0005515
Accr1g02852 1004 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 408 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02852 Accr-Chr1 65523236 65529709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02852 16 1000 Receptor kinase-like Gene Family AT1G53440 58.959 0.0 1136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02852 PK_Tyr_Ser-Thr 8.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02852 - - gmx:121173337 1286.94