Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02851 ATGGAATTCGCCATTTCAAGCTCGATATCTTTTTCTGTATTTCTCTTCGGATTTCTACTGCTAAGTTTCTTCACAGCTTTTCCTTCAAAAGCTCAACTTATACCCCGAGAAGAAGTGGAGGCTTTACAGGCAATATCTGATAAGATCACAAATGTGAATTGGAAGGTGACACCAACATCTTGTATTAAAGGGGATGGCTTTAATAACATCTTTACTTCACCTCCTGGAGTAACCAGGAATGTCACTTGCAATTGCACTTTCCAAAACGGCACCGTTTGCCACGTCACTAATATACTGTTGAAAAGCCAAAATGTAGCAGGAGAAATACCCAGTGAATTTGGAAATCTCACCCATTTGACTGAACTTGATCTTTATCTCAACTATCTCAATGGCACTATTCCAACATCTTTTAGGCACATCCCTCTCGTCACTGTGTCCCTCGTGGGGAATCGAATTAGTGGTTCAATTCCCACAGAATTGGGTGAAATTGCTACTCTGAGGGATCTGGTCTTTGAAGATAATCAGTTTGGAGGACCTCTTCCTCATAGTCTTGGAAATTTGAGCAACTTACGGAGAATACGCCTTTCTGCAAATAACTTTACAGGAACAATACCAGAAACGTATGGGAATCTGAAGAACATGATTGATTTTTCTATAGATGGGAGTACCTTATCGGGAAAGATACCAAGTTTTATTGGGAACTGGACCACAATTCTCTATATGGATATGGAGGGCACAGGCATGGAAGGCCCAATTCCTTCCACCATATCGTTGTTGACAAATTTGAAAGAATTGAGAATATCTGACTTGAAAGGAACAACAACTATGGTATTTCCTAATCTGAAGAATTTGAAGAGTTTGGAACGGCTGATACTAAGGAATTGCTTGATTACTGGTCCCATTCCAATGTATATTGGTGAAATGACAAACTTAAGGACTTTGGACCTAAGCTTTAACATGTTGTCTGGCTCAATCCCTGACTCATTTCAAAACTTGAATCTTATTAATCACATGTTTCTGACTAACAATTCTTTGAGTGGAGCAATTTCAGAATGGATGCTACAGAAATATAATACTGATTTATCTTACAATAATTTTACTGTGGCTTCTACATCTAATTGCCAGAGCTTACAAGTGAACTTAGCTTCCAGCCTTTCATCTTCAGTTAGAAATGCAACCTTTTGTCTGAAGAAGGGCCTAACTTGTCCAGGAAAACCTCAGTATTATTCATTGTTCATAAATTCTGGAGGACCCAAGATGGAGTTTGAGGGGAATGAATATGAAGAAGATCTCAATCAAAATGGCATTGCATACTTTTATATAAAAGATGACAAATGGGCCTATAGCAGCACGGGAACATACATATATAATGATAAAGCTAATTATGTAGCGAGTCTACAAACAAATAAGTTTTCTATGAATGTTAATGGCTCCGAATACTACCAAACAGCGCGGCTCAGCCCTCAATCACTGAAGTACTATGGCCTATGTATGATGAAGGGTGGCTATAAAGTAAAGCTGCATTTTGCGGAGATAATGTTTTCTGATGACCAAACCTTTAACAGTCTTGGAACTCGCATATTCGATGTTTCAATTCAAGGTTTTAAATACTTGAGAGATTTTAACATTGCGAAAGAAGCTGGTGGAGCTGGTAAAGGCATCACTAAGGTATTTGATGTTGATGTGAATGATACCACCCTGGAGATTCATTTATATTGGGCAGGGAAAGGAACTACCGCAATTCCCACTAGGGGTGTATATGGACCTCTAATATCTGCGATCACCGTGACCCCAAATTTCAAAGTTCCTTCACAAGGGTTCTTTGTTAATGACCAAAGAAAAGAAAAAGGGTTCTCAGCTGCAGCTATCGTTGGAATTGTGGTTGGATTGTGTGTATTCCTCATACTAGTGCTACTAATTATTATCCTCCCAAAGAATGGTTTCCTTGGTGGGAAAGATCCTCAAGACATAGATCTTAAGGGTTTGGATCGTAAAACTTGTATGTTTACCTTAAAGGAAATCAAAGCAGCAACCAACAACTTCAATGCTGATAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTTTAAGGGCATTCTCCCAGATGGCAGAATAATTGCAGTTAAGAAGCTATCCGCTAAATCAAGGCAAGGGAATCGTGAATTTCTAAATGAAGTAGGCATGATTTTTGCTTTGCATCACCCTTGCCTTGTTAAGCTTTATGGCTGTTGTGTTGAAGGAGATCAATTGTTGCTTGTATACGAGTTTATGGATAACAATAGCCTTGCTCGTGCTTTATTTGGCCCAGAAGAATTCCAGTTAAAATTGGAGTGGCCAACTAGACACAAGATTTGTGTTGGGATTGCTAGAGGTTTGGTTTACCTTCACGAAGAATCAATATTTAAAATTGTTCATAGAGACATCAAGTCCACTAATGTTTTGCTTGATAAAGATCTCAACCCTAAGATATCTGATTTTGGTTTGGCCAAGCTTTATGAGGAGGAAAGTACACACATTAGCACCAGAATTTCTGGAACTCGCGGTTACATGGCCCCTGAATATGCAATGCATGGATATTTGACTAAGAAAGCAGATGTTTATAGTTTTGGAATCGTTACTTTGGAAATTCTCAGCGGCAAGACGAACACTACTCAAAAGTCAGAGGAAGAATGTTTTTATTTGCGTGATTGGGCACATCAGTTGAAAGATGGAAATCATCTGATGGATCTGGTGGATCCAAAGTTGGGTGAGGACTTTAATAGAGAGGAAATAATGACTGTGATAGATGTGGCTCTCCAATGCACTGAAAACTCTCCAGCACTTAGGCCTACCATGACTAAAGTGCTTAGCATTCTTGAAGGCAAGCCTGCTATTCAAGAGGTAGTGTCAGATGACGAAAGTGAGATTATTTTGGATGATGACTTGAAATTGACCAAGAAACAAGAAAGCTGA 2952 0.3906 MEFAISSSISFSVFLFGFLLLSFFTAFPSKAQLIPREEVEALQAISDKITNVNWKVTPTSCIKGDGFNNIFTSPPGVTRNVTCNCTFQNGTVCHVTNILLKSQNVAGEIPSEFGNLTHLTELDLYLNYLNGTIPTSFRHIPLVTVSLVGNRISGSIPTELGEIATLRDLVFEDNQFGGPLPHSLGNLSNLRRIRLSANNFTGTIPETYGNLKNMIDFSIDGSTLSGKIPSFIGNWTTILYMDMEGTGMEGPIPSTISLLTNLKELRISDLKGTTTMVFPNLKNLKSLERLILRNCLITGPIPMYIGEMTNLRTLDLSFNMLSGSIPDSFQNLNLINHMFLTNNSLSGAISEWMLQKYNTDLSYNNFTVASTSNCQSLQVNLASSLSSSVRNATFCLKKGLTCPGKPQYYSLFINSGGPKMEFEGNEYEEDLNQNGIAYFYIKDDKWAYSSTGTYIYNDKANYVASLQTNKFSMNVNGSEYYQTARLSPQSLKYYGLCMMKGGYKVKLHFAEIMFSDDQTFNSLGTRIFDVSIQGFKYLRDFNIAKEAGGAGKGITKVFDVDVNDTTLEIHLYWAGKGTTAIPTRGVYGPLISAITVTPNFKVPSQGFFVNDQRKEKGFSAAAIVGIVVGLCVFLILVLLIIILPKNGFLGGKDPQDIDLKGLDRKTCMFTLKEIKAATNNFNADNKIGEGGFGPVFKGILPDGRIIAVKKLSAKSRQGNREFLNEVGMIFALHHPCLVKLYGCCVEGDQLLLVYEFMDNNSLARALFGPEEFQLKLEWPTRHKICVGIARGLVYLHEESIFKIVHRDIKSTNVLLDKDLNPKISDFGLAKLYEEESTHISTRISGTRGYMAPEYAMHGYLTKKADVYSFGIVTLEILSGKTNTTQKSEEECFYLRDWAHQLKDGNHLMDLVDPKLGEDFNREEIMTVIDVALQCTENSPALRPTMTKVLSILEGKPAIQEVVSDDESEIILDDDLKLTKKQES 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02851 983 Pfam Malectin domain 410 594 IPR021720 -
Accr1g02851 983 Pfam Protein kinase domain 682 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02851 983 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 651 756 - -
Accr1g02851 983 ProSiteProfiles Leucine-rich repeat profile. 310 332 IPR001611 GO:0005515
Accr1g02851 983 SUPERFAMILY L domain-like 84 367 - -
Accr1g02851 983 Gene3D - 408 599 - -
Accr1g02851 983 Gene3D Phosphorylase Kinase; domain 1 652 756 - -
Accr1g02851 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Accr1g02851 983 SMART serkin_6 681 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02851 983 FunFam Putative LRR receptor-like serine/threonine-protein kinase 757 964 - -
Accr1g02851 983 Gene3D Ribonuclease Inhibitor 38 205 IPR032675 -
Accr1g02851 983 Gene3D Ribonuclease Inhibitor 273 388 IPR032675 -
Accr1g02851 983 SUPERFAMILY Protein kinase-like (PK-like) 665 953 IPR011009 -
Accr1g02851 983 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Accr1g02851 983 Gene3D Transferase(Phosphotransferase) domain 1 757 974 - -
Accr1g02851 983 SMART LRR_typ_2 308 331 IPR003591 -
Accr1g02851 983 SMART LRR_typ_2 187 210 IPR003591 -
Accr1g02851 983 SMART LRR_typ_2 116 139 IPR003591 -
Accr1g02851 983 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 973 - -
Accr1g02851 983 CDD STKc_IRAK 687 954 - -
Accr1g02851 983 ProSiteProfiles Protein kinase domain profile. 681 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02851 983 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 408 599 - -
Accr1g02851 983 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 35 271 - -
Accr1g02851 983 Gene3D Ribonuclease Inhibitor 206 272 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02851 Accr-Chr1 65496755 65511731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02851 17 968 Receptor kinase-like Gene Family AT1G53440 56.341 0.0 1066
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02851 Pkinase 9.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02851 - - qsa:O6P43_001071 1174.46