Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02848 ATGGCTTTAGGCTCTCTTGTTCCAGAAGAAGGTAGCTCTCTTGTTCCAGAAGAAGTGGAAGCTTTGAGAGACATAGGGAAGAGGCTGGGGAAGAAGGACTGGAACTTCAGCGTGGATCCATGCAGTGGACTCAGTGGATGGAACGTCAACTGTTCCAGCGGCCACATCACTAGCATCATTCTTCGAGAAGGGAGTCTACAAGGGAGTCTACCCCAGGAGCTGGTTAGGTTGCCGCACCTTCAAAACCTCATCCTTACACGCAACTACCTCACCGGCACAATCCCTCCACTATGGGGCTCTATGAAACTTGTTACTATCATCCTCCTTGCAAATCGTTTGACGGGTTCAATCCCAACAGAGCTGGCAAACATTTCCACTCTCCAGATTTTAAACATAGGTTTCAATCAATTTTCGGGAAATCTTCCTCCTGAGCTCGGCAAACTACCTCAGCTTCAAAGACTGCATCTTGCTTCAAACAATTTCACTGGGGAAATACCTGCAACATTCGCTGGCCTCACCAAGTTGACTCACTTTCGGATCAGTGACAACCAATTTTTTGGGAAGATACCCGATTTCATTGGGAACTGGAAGGATCTCAGGATACTAGCAATTGTAGGGAGTGGCTTGAGTGGACCCATTCCGGCTGGACTTTCCCTTTTAGTAAACTCAGTTGATCTGAGAATTAGCAATTTAAATGGACCCGATTCAAAATTTCCGCAACTGGACAATATGAAAAAGCTGGAAACAGTGATATTGAGGAGCTGCAACATTGTTGGATCTCTCCGACTTGACTTCATTGAGAACATGCCTTATTTGATTGCGTTGGACCTTAGCTTTAACAAATTAAGTGGAGAAATGCCATCCAGCTTCCCTAGTCAATCACAAGTGAAATCCTTATATTTGTCAGGAAACATGCTAAGCGGACCAGTGCCTGATTGGTTAATGAAAAGTGAAAACAATGTAGACCTTTCTTACAACAACTTCAGCATCAGCAACTCGAAGACTTCACTTTGTGAGCAACAGAATGTGAATTTATTCGCAAATCCTTTGCAAGGAAATAAGCCGGGACTCATCCCATGCTCGAGAAGTTGTGCTAAAACTTTCTATTCCTTCCGCATAAATTGTGGTGGGAAGGAAGTTTATGAAGGAGGGAAAAAATACGACGAAGACCGTACCGAGGGAAAAGCATCTCAACTATTCGTGAGTGAAAGATCAAACTGGGCATTCAGTAACACCGGTCATTTCGTCGATGATGACCAGCGTTCCACGAAATCTTACATTGCGGATGCTAATAATAATAACAAGAATAATTCAGAACTCTTTATGGCGAATACTGAGCTCTACACAACTGCTCGCCTCTCTCCCATTTCCCTGACTTACTATGGTTTTTGCCTGAAAAATGGTAACTACACAGTGACCCTCCATTTTGCTGAGATAATGTTCACTGCTGATAACACCTTCAGGAGCTTGGGAAGACGAGTATTTGATGTCTACATTCAGGGGAAACTGGTGCAGAAGGATTTCAATATTGCGGCTGAAGCAGGAGGTGCAGGTAAGGCAGTCATAAAAAATTACACTGTTGAAGTTAACAATAGCGACTTGGAGATTCGCTTATATTGGGCTGGGAAAGGCACAAACAGTATTCCTGATAGAGCAGTGTATGGTCCTCTCATATCAGCAATTTCTGTGGATGCAGATTTTGCAATCCCACTTGAAAGTGAAAGTCATCTACCTTTTGGCGTTGTTATTGCAATTGTGGTTGTGGGGGCAGTTCTGACTGTCTTGGGTATACTTTGGTGGATATGCTTTTCCAAGAAAAAAAGTACACCTCATCAAGAACTAAAGATTTCAGACTTGCAAACTAGTTCATTTACCTTAGAGCAAATAATGGCAGCCACAGACAACTTTGATGTTACCAATAAGATTGGAGAAGGAGGTTTTGGTCCTGTTTACAAGGGCTTCTTGTTAGATGGAACCGTAATAGCCGTTAAGCAGCTTTCTTCCAAGTCACGTCAAGGGAATCGTGAGTTCTTAAATGAGATAGGGATGATTTCTGCTCTGCAGAATCCTCATCTTGTTAAGCTTTATGGATGTTGTGTCCAGGGAAGTCAATTATTGCTGGTATATGAATACATGGAGAACAATAGCCTTGCCCGTGCTTTATTTGGCCCAGAAAATTGCCGGCTCAACCTGGATTGGTCCAAAAGGAAGAATATTTGTATTGGTATAGCAAAAGGTTTGGCTTTTATGCATGAAGAATCAAGACTGAAAATTATTCACAGAGACATTAAGGCCACTAATATACTGCTTGATAGAGATCTTAATCCCAAGATTTCTGACTTTGGTTTGGCCAAACTTTACGATGAGGACAATACACATATTAGCACCAGAATTGCCGGAACTCGTGGGTATATAGCCCCTGAATACGCAATGCATGGATATTTGACCAAGAAGGCAGATATTTATAGTTTTGGAATTGTAGCTTTGGAAATTATTAGTGGCAAAACTAATACCACTGAACAATCAGAGGAAGAATGTTTCTATTTGCGTGATTGGGCACATGAGTTGAAAGATGGAGGGAATCTGACGGATCTAGTGGATCCAAGGTTGTTGGGTGTGGACAACATTAACACAGAGGAAATAATGGTTATGATTGATGTGGCTCTCCAATGCACTGAAAATTCTCCAAAACTAAGGCCTACCATGTCCAAAGTGCTTAGCATTCTTGAAGGCAGGACTGTGGTGGAGGAGGTAGTCTCAGATGAAAGTGAGATTATTATGGATGATGACTTGACATTGGAATCGACCAAGAAAGAAGAAGCTGATAAGGACGAAACCTGGCCAATAAATTCGTCAAGTCACGTGTCTCATACTACATATACATCTTTTTCTGAAACAAACTATGTATTGTAA 2913 0.4212 MALGSLVPEEGSSLVPEEVEALRDIGKRLGKKDWNFSVDPCSGLSGWNVNCSSGHITSIILREGSLQGSLPQELVRLPHLQNLILTRNYLTGTIPPLWGSMKLVTIILLANRLTGSIPTELANISTLQILNIGFNQFSGNLPPELGKLPQLQRLHLASNNFTGEIPATFAGLTKLTHFRISDNQFFGKIPDFIGNWKDLRILAIVGSGLSGPIPAGLSLLVNSVDLRISNLNGPDSKFPQLDNMKKLETVILRSCNIVGSLRLDFIENMPYLIALDLSFNKLSGEMPSSFPSQSQVKSLYLSGNMLSGPVPDWLMKSENNVDLSYNNFSISNSKTSLCEQQNVNLFANPLQGNKPGLIPCSRSCAKTFYSFRINCGGKEVYEGGKKYDEDRTEGKASQLFVSERSNWAFSNTGHFVDDDQRSTKSYIADANNNNKNNSELFMANTELYTTARLSPISLTYYGFCLKNGNYTVTLHFAEIMFTADNTFRSLGRRVFDVYIQGKLVQKDFNIAAEAGGAGKAVIKNYTVEVNNSDLEIRLYWAGKGTNSIPDRAVYGPLISAISVDADFAIPLESESHLPFGVVIAIVVVGAVLTVLGILWWICFSKKKSTPHQELKISDLQTSSFTLEQIMAATDNFDVTNKIGEGGFGPVYKGFLLDGTVIAVKQLSSKSRQGNREFLNEIGMISALQNPHLVKLYGCCVQGSQLLLVYEYMENNSLARALFGPENCRLNLDWSKRKNICIGIAKGLAFMHEESRLKIIHRDIKATNILLDRDLNPKISDFGLAKLYDEDNTHISTRIAGTRGYIAPEYAMHGYLTKKADIYSFGIVALEIISGKTNTTEQSEEECFYLRDWAHELKDGGNLTDLVDPRLLGVDNINTEEIMVMIDVALQCTENSPKLRPTMSKVLSILEGRTVVEEVVSDESEIIMDDDLTLESTKKEEADKDETWPINSSSHVSHTTYTSFSETNYVL 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02848 970 Gene3D Ribonuclease Inhibitor 18 166 IPR032675 -
Accr1g02848 970 Gene3D Phosphorylase Kinase; domain 1 601 711 - -
Accr1g02848 970 Pfam Malectin domain 370 561 IPR021720 -
Accr1g02848 970 SMART serkin_6 636 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02848 970 Pfam Protein kinase domain 637 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02848 970 SUPERFAMILY L domain-like 34 352 - -
Accr1g02848 970 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Accr1g02848 970 Pfam Leucine rich repeat 246 306 IPR001611 GO:0005515
Accr1g02848 970 ProSiteProfiles Protein kinase domain profile. 636 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02848 970 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 942 - -
Accr1g02848 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 758 770 IPR008271 GO:0004672|GO:0006468
Accr1g02848 970 FunFam Leucine-rich repeat receptor protein kinase EMS1 125 212 - -
Accr1g02848 970 Gene3D Ribonuclease Inhibitor 224 368 IPR032675 -
Accr1g02848 970 FunFam Putative LRR receptor-like serine/threonine-protein kinase 712 921 - -
Accr1g02848 970 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 605 711 - -
Accr1g02848 970 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 368 566 - -
Accr1g02848 970 SUPERFAMILY Protein kinase-like (PK-like) 612 910 IPR011009 -
Accr1g02848 970 Gene3D Ribonuclease Inhibitor 167 223 IPR032675 -
Accr1g02848 970 Gene3D - 369 566 - -
Accr1g02848 970 Gene3D Transferase(Phosphotransferase) domain 1 712 930 - -
Accr1g02848 970 CDD STKc_IRAK 642 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02848 Accr-Chr1 65415362 65423679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02848 12 925 Receptor kinase-like Gene Family AT1G53420 53.152 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02848 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02848 - - qsa:O6P43_001072 1111.29