Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02847 ATGGATAAGCAATTTGGCATTCTGCTACTATTATTTGTCTGCACAACTATGGCTTTAGGCTCTCTTGTTCCAGAAGAAGGTAGCTCTCTTGTTCCAGAAGAAGTGGAAGCTTTGAGAGACATAGGGAAGAGGCTGGGGAAGAAGGACTGGAACTTCAGCGTGGATCCATGCAGTGGACTCAGTGGATGGAACGTCAACTGTTCCAGCGGCCACATCACTAGCATCATTCTTCGAGAAGGGAGTCTACAAGGGAGTCTACCCCAGGAGCTGGTTAGGTTGCCGCACCTTCAAAACCTCATCCTTACACGCAACTACCTCACCGGCACAATCCCTCCACTATGGGGCTCTATGAAACTTGTTACTATCATCCTCCTTGCAAATCGTTTGACGGGTTCAATCCCAACAGAGCTGGCAAACATTTCCACTCTCCAGATTTTAAACATAGGTTTCAATCAATTTTCGGGAAATCTTCCTCCTGAGCTCGGCAAACTACCTCAGCTTCAAAGACTGCATCTTGCTTCAAACAATTTCACTGGGGAAATACCTGCAACATTCGCTGGCCTCACCAAGTTGACTCACTTTCGGATCAGTGACAACCAATTTTTTGGGAAGATACCCGATTTCATTGGGAACTGGAAGGATCTCAGGATACTAGCAATTGTAGGGAGTGGCTTGAGTGGACCCATTCCGGCTGGACTTTCCCTTTTAGTAAACTCAGTTGATCTGAGAATTAGCAATTTAAATGGACCCGATTCAAAATTTCCGCAACTGGACAATATGAAAAAGCTGGAAACAGTGATATTGAGGAGCTGCAACATTGTTGGATCTCTCCGACTTGACTTCATTGAGAACATGCCTTATTTGATTGCGTTGGACCTTAGCTTTAACAAATTAAGTGGAGAAATGCCATCCAGCTTCCCTAGTCAATCACAAGTGAAATCCTTATATTTGTCAGGAAACATGCTAAGCGGACCAGTGCCTGATTGGTTAATGAAAAGTGAAAACAATGTAGACCTTTCTTACAACAACTTCAGCATCAGCAACTCGAAGACTTCACTTTGTGAGCAACAGAATGTGAATTTATTCGCAAATCCTTTGCAAGGAAATAAGCCGGGACTCATCCCATGCTCGAGAAGTTGTGCTAAAACTTTCTATTCCTTCCGCATAAATTGTGGTGGGAAGGAAGTTTATGAAGGAGGGAAAAAATACGACGAAGACCGTACCGAGGGAAAAGCATCTCAACTATTCGTGAGTGAAAGATCAAACTGGGCATTCAGTAACACCGGTCATTTCGTCGATGATGACCAGCGTTCCACGAAATCTTACATTGCGGATGCTAATAATAATAACAAGAATAATTCAGAACTCTTTATGGCGAATACTGAGCTCTACACAACTGCTCGCCTCTCTCCCATTTCCCTGACTTACTATGGTTTTTGCCTGAAAAATGGTAACTACACAGTGACCCTCCATTTTGCTGAGATAATGTTCACTGCTGATAACACCTTCAGGAGCTTGGGAAGACGAGTATTTGATGTCTACATTCAGGGGAAACTGGTGCAGAAGGATTTCAATATTGCGGCTGAAGCAGGAGGTGCAGGTAAGGCAGTCATAAAAAATTACACTGTTGAAGTTAACAATAGCGACTTGGAGATTCGCTTATATTGGGCTGGGAAAGGCACAAACAGTATTCCTGATAGAGCAGTGTATGGTCCTCTCATATCAGCAATTTCTGTGGATGCAGATTTTGCAATCCCACTTGAAAGTGAAAGTCATCTACCTTTTGGCGTTGTTATTGCAATTGTGGTTGTGGGGGCAGTTCTGACTGTCTTGGGTATACTTTGGTGGATATGCTTTTCCAAGAAAAAAAGTACACCTCATCAAGAACTAAAGATTTCAGACTTGCAAACTAGTTCATTTACCTTAGAGCAAATAATGGCAGCCACAGACAACTTTGATGTTACCAATAAGATTGGAGAAGGAGGTTTTGGTCCTGTTTACAAGGGCTTCTTGTTAGATGGAACCGTAATAGCCGTTAAGCAGCTTTCTTCCAAGTCACGTCAAGGGAATCGTGAGTTCTTAAATGAGATAGGGATGATTTCTGCTCTGCAGAATCCTCATCTTGTTAAGCTTTATGGATGTTGTGTCCAGGGAAGTCAATTATTGCTGGTATATGAATACATGGAGAACAATAGCCTTGCCCGTGCTTTATTTGGCCCAGAAAATTGCCGGCTCAACCTGGATTGGTCCAAAAGGAAGAATATTTGTATTGGTATAGCAAAAGGTTTGGCTTTTATGCATGAAGAATCAAGACTGAAAATTATTCACAGAGACATTAAGGCCACTAATATACTGCTTGATAGAGATCTTAATCCCAAGATTTCTGACTTTGGTTTGGCCAAACTTTACGATGAGGACAATACACATATTAGCACCAGAATTGCCGGAACTCGTGGGTATATAGCCCCTGAATACGCAATGCATGGATATTTGACCAAGAAGGCAGATATTTATAGTTTTGGAATTGTAGCTTTGGAAATTATTAGTGGCAAAACTAATACCACTGAACAATCAGAGGAAGAATGTTTCTATTTGCGTGATTGGGCACATGAGTTGAAAGATGGAGGGAATCTGACGGATCTAGTGGATCCAAGGTTGTTGGGTGTGGACAACATTAACACAGAGGAAATAATGGTTATGATTGATGTGGCTCTCCAATGCACTGAAAATTCTCCAAAACTAAGGCCTACCATGTCCAAAGTGCTTAGCATTCTTGAAGGCAGGACTGTGGTGGAGGAGGTAGTCTCAGATGAAAGTGAGATTATTATGGATGATGACTTGACATTGGAATCGACCAAGAAAGAAGAAGCTGATAAGGACGAAACCTGGCCAATAAATTCGTCAAGTCACGTGTCTCATACTACATATACATCTTTTTCTGAAACAAACTATGTATTGTAA 2961 0.4201 MDKQFGILLLLFVCTTMALGSLVPEEGSSLVPEEVEALRDIGKRLGKKDWNFSVDPCSGLSGWNVNCSSGHITSIILREGSLQGSLPQELVRLPHLQNLILTRNYLTGTIPPLWGSMKLVTIILLANRLTGSIPTELANISTLQILNIGFNQFSGNLPPELGKLPQLQRLHLASNNFTGEIPATFAGLTKLTHFRISDNQFFGKIPDFIGNWKDLRILAIVGSGLSGPIPAGLSLLVNSVDLRISNLNGPDSKFPQLDNMKKLETVILRSCNIVGSLRLDFIENMPYLIALDLSFNKLSGEMPSSFPSQSQVKSLYLSGNMLSGPVPDWLMKSENNVDLSYNNFSISNSKTSLCEQQNVNLFANPLQGNKPGLIPCSRSCAKTFYSFRINCGGKEVYEGGKKYDEDRTEGKASQLFVSERSNWAFSNTGHFVDDDQRSTKSYIADANNNNKNNSELFMANTELYTTARLSPISLTYYGFCLKNGNYTVTLHFAEIMFTADNTFRSLGRRVFDVYIQGKLVQKDFNIAAEAGGAGKAVIKNYTVEVNNSDLEIRLYWAGKGTNSIPDRAVYGPLISAISVDADFAIPLESESHLPFGVVIAIVVVGAVLTVLGILWWICFSKKKSTPHQELKISDLQTSSFTLEQIMAATDNFDVTNKIGEGGFGPVYKGFLLDGTVIAVKQLSSKSRQGNREFLNEIGMISALQNPHLVKLYGCCVQGSQLLLVYEYMENNSLARALFGPENCRLNLDWSKRKNICIGIAKGLAFMHEESRLKIIHRDIKATNILLDRDLNPKISDFGLAKLYDEDNTHISTRIAGTRGYIAPEYAMHGYLTKKADIYSFGIVALEIISGKTNTTEQSEEECFYLRDWAHELKDGGNLTDLVDPRLLGVDNINTEEIMVMIDVALQCTENSPKLRPTMSKVLSILEGRTVVEEVVSDESEIIMDDDLTLESTKKEEADKDETWPINSSSHVSHTTYTSFSETNYVL 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02847 986 ProSiteProfiles Protein kinase domain profile. 652 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02847 986 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Accr1g02847 986 Gene3D Ribonuclease Inhibitor 34 182 IPR032675 -
Accr1g02847 986 Gene3D - 385 582 - -
Accr1g02847 986 Gene3D Ribonuclease Inhibitor 240 384 IPR032675 -
Accr1g02847 986 Gene3D Ribonuclease Inhibitor 183 239 IPR032675 -
Accr1g02847 986 FunFam Putative LRR receptor-like serine/threonine-protein kinase 728 937 - -
Accr1g02847 986 Pfam Malectin domain 386 577 IPR021720 -
Accr1g02847 986 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 958 - -
Accr1g02847 986 SMART serkin_6 652 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02847 986 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 384 582 - -
Accr1g02847 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Accr1g02847 986 Pfam Protein kinase domain 653 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02847 986 SUPERFAMILY Protein kinase-like (PK-like) 628 926 IPR011009 -
Accr1g02847 986 FunFam Leucine-rich repeat receptor protein kinase EMS1 141 228 - -
Accr1g02847 986 SUPERFAMILY L domain-like 50 368 - -
Accr1g02847 986 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 621 727 - -
Accr1g02847 986 Gene3D Phosphorylase Kinase; domain 1 617 727 - -
Accr1g02847 986 Gene3D Transferase(Phosphotransferase) domain 1 728 946 - -
Accr1g02847 986 CDD STKc_IRAK 658 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02847 Accr-Chr1 65415362 65423727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02847 28 941 Receptor kinase-like Gene Family AT1G53420 53.152 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02847 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02847 - - qsa:O6P43_001072 1116.68