Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02839 ATGCCTGGGAATAGTAAGTATAACGGTAATCCTAGTCATATTCCAGGTCGTGTTGGACGACTTGTCAGAGACAGAGAGCTAAGAAAAACCGGCAGGGCTTCTCATCTCAATGAGTCAGCTGATAATAATAATAATAATGGGGTAACTGAACCGTTTCAGCATAACCAGCGTTTCAGAGAAGATAATCACACAGGGGCTTCTCATGCACAATACCTGGAGGGAGCTGCAAGGGGGCTTAGTGAGAGATGTGATACACATGATGGGAAGTCTTATAGACAACGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCACAGCAATTAGGAAAGGCGAAGATTCATGGTCTCTAGAGCTCAGTGCTGGAGGTCTAGTTAGCGCACTTTTAGGTGTTAAGGAGTTTGAGGCAAGGTGGATAGGGTGGGCTGGCGTCAATGTGCCAGATGAGACTGGACAGAAGGCACTTACTAAAGCTTTGGATGAAAAGAGGTGCATCCCAGTATTTCTTGATGAAGAGATTGTTCACCAATATTATAATGGTTACTGCAACAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCCCAAGAAGATCGCCTTGCTACTACACGGAGCTTCCAGTCTCAGTTTGAAGCATACAAGAAAGCAAACCAAATGTTTGCAGATGTTGTGAACAAGCACTATTTAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTTATGTTTCTTCCAAAATGTTTAAAGGAACATAACAGTAAAATGAAAGTTGGTTGGTTTCTTCACACCCCATTTCCATCTTCTGAAATTCATAGGACACTACCATCACGTTCAGAGCTCCTTCGTGCTGTTCTTGCTGCTGATTTAGTAGGATTTCACACCTATGATTATGCACGCCATTTTGTTAGTGCCTGTACTCGCATTCTTGGACTTGAGGGCACTCCAGAAGGAGTTGAAGATCAGGGGAGATTGACTCGAGTTGCTGCATTTCCGATTGGAATAGACTCTGATCGATTCAGACGTGCACTTGAACTTAATCAAGTGGAGGAACATATCAAAGAATTGGAAAAAAGATTTGAGGGTAGAAAGGTAATGTTAGGTGTTGATCGGCTTGATATGATTAAAGGGATTCCTCAGAAAATTCTGGCATTTGAAAAATTTTTGGAAGAGAACGTTGATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAGTATCAGAAGCTTACAAGCCAGGTCCATGAAATTGTTGGTCGCATCAATGGAAGATTTGGAACATTGACTGCTGTTCCTATACATCATCTGGACCGATCACTTGATTTTCATGCACTATGTGCTTTATATGCTGTTACTGATGTAGCACTGGTCACATCTTTGAGGGATGGGATGAATCTTGTCAGTTATGAATATGTGGCCTGCCAGGATAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCGCAGTCTCTAGGTGGAGGAGCAGTTCTGGTTAACCCGTGGAATGTCACAGAAGTTGCAACCGCAATTGCACAGGCTCTGGATATGTCACCTGGGGAAAGAGAGAAACGTCATAGGCACAATTATGTACATGTAACAACCCACACTGCTCAAGAATGGGCTGAGACTTTTGTAAGTGAACTAAATGATACTGTGGTCGAGGCACAACTGAGGACAAGACAAGTGCCACCTACACTTTCAACCAAGATTACAGTTGAACGCTATCTGCAGTCAAGTAATCGATTGCTTATATTGGGATTCAATGCAACTTTAACTGAACCAGTTGAAAAGAAAGGCGACCAGATTAAGGAAATGGAACTCAAGGTGCATCCAGAATTAAAACGATCATTGACAGCACTTTGTGATGACCCGAAGACCACAATTGTTGTGCTTAGTGGAAGTGGTCGAAATGTCCTATATAACAACTTTAAGGAATACAACATGTGGCTAGCAGCAGAGAACGGGATGTTTTTACGCCCCCCAAAGGGAGAATGGATGACAACAATGCCAGAGCATCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAATACTTCACAGAAAGAACTCCCCGGTCTCATTTTGATTTTGATGAAAGGGAGACCTCTCTTGTATGGAACTACAAATATGCGGATATTGAGTTTGGAAGACTTCAAGCGAGGGATATGTTGCAGCATCTCTGGACTGGTCCAATTTCCAATGCATCAGTTGATGTTGTTCAAGGTAGCCGATCAGTTGAAGTGCGAGCCGTTGGTGTTACGAAGGGAGCAGCTATTGACCGCATCTTGGGTGAGATAGTTCACAGTAAATCCATGATAGCACCAATCGATTATGTTCTGTGTATAGGACATTTTCTATCAAAGCAGGATGAAGATGTTTATTCCTTCTTTGAGCCGGAGCTTCCTTCTAGCAGCGTGGGCGTTGCTCGAGCCAAGACTTCGGAAGCAGTTAAGTTTCCTGCAGAGAGAAGATCATCTCTGAAGATGCCAACCAGTACTAAAACAGGAACAAAATCAGCTCAAAATAAGGCACAAAGGCCAGTGTCAAATTCTGAGAAGAAAACCACAAACCATATATGTAATGCCGCACCAAGGAGGCCAGCACCTGATAAGATCTCCTCATGGAATGTGCTTGACCTCAAGAAGGACAATTACTTCTCTTGTGCCGTTGGCCGAACCCGAACAAATGCTCGCTATGTGCTCGGATCCTCAGATGATGTTGCTGCTTTCCTCAAGGAACTGGCTCGTGCATCTTCTCCTTACTATTTATGA 2808 0.4341 MPGNSKYNGNPSHIPGRVGRLVRDRELRKTGRASHLNESADNNNNNGVTEPFQHNQRFREDNHTGASHAQYLEGAARGLSERCDTHDGKSYRQRLLVVANRLPVTAIRKGEDSWSLELSAGGLVSALLGVKEFEARWIGWAGVNVPDETGQKALTKALDEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYKKANQMFADVVNKHYLEGDVVWCHDYHLMFLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFRRALELNQVEEHIKELEKRFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENVDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEYVACQDKKKGVLILSEFAGAAQSLGGGAVLVNPWNVTEVATAIAQALDMSPGEREKRHRHNYVHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPTLSTKITVERYLQSSNRLLILGFNATLTEPVEKKGDQIKEMELKVHPELKRSLTALCDDPKTTIVVLSGSGRNVLYNNFKEYNMWLAAENGMFLRPPKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFDERETSLVWNYKYADIEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMIAPIDYVLCIGHFLSKQDEDVYSFFEPELPSSSVGVARAKTSEAVKFPAERRSSLKMPTSTKTGTKSAQNKAQRPVSNSEKKTTNHICNAAPRRPAPDKISSWNVLDLKKDNYFSCAVGRTRTNARYVLGSSDDVAAFLKELARASSPYYL 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02839 935 MobiDBLite consensus disorder prediction 18 35 - -
Accr1g02839 935 Pfam Glycosyltransferase family 20 94 559 IPR001830 GO:0003824|GO:0005992
Accr1g02839 935 CDD HAD_TPP 592 828 - -
Accr1g02839 935 Gene3D - 681 763 - -
Accr1g02839 935 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 94 559 IPR012766 GO:0003825|GO:0005992
Accr1g02839 935 MobiDBLite consensus disorder prediction 36 51 - -
Accr1g02839 935 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 341 543 - -
Accr1g02839 935 MobiDBLite consensus disorder prediction 1 51 - -
Accr1g02839 935 MobiDBLite consensus disorder prediction 831 879 - -
Accr1g02839 935 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 86 340 - -
Accr1g02839 935 Gene3D Glycogen Phosphorylase B; 336 543 - -
Accr1g02839 935 Gene3D Glycogen Phosphorylase B; 82 333 - -
Accr1g02839 935 MobiDBLite consensus disorder prediction 838 870 - -
Accr1g02839 935 FunFam Alpha,alpha-trehalose-phosphate synthase 615 686 - -
Accr1g02839 935 SUPERFAMILY HAD-like 591 927 IPR036412 -
Accr1g02839 935 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 87 928 IPR001830 GO:0003824|GO:0005992
Accr1g02839 935 Pfam Trehalose-phosphatase 614 827 IPR003337 GO:0003824|GO:0005992
Accr1g02839 935 Gene3D - 615 808 IPR023214 -
Accr1g02839 935 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 681 763 - -
Accr1g02839 935 CDD GT20_TPS 94 559 IPR001830 GO:0003824|GO:0005992
Accr1g02839 935 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02839 Accr-Chr1 65326790 65341036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02839 1 931 Trehalose Biosynthesis Gene Families AT1G78580 76.316 0.0 1444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02839 K16055 - qsa:O6P43_029237 1563.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02839 1 65326790 65341036 Accr1g02839 1 65326790 65341036 ECH