Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02838 ATGCCTGGGAATAGTAAGTATAACGGTAATCCTAGTCATATTCCAGGTCGTGTTGGACGACTTGTCAGAGACAGAGAGCTAAGAAAAACCGGCAGGGCTTCTCATCTCAATGAGTCAGCTGATAATAATAATAATAATGGGGTAACTGAACCGTTTCAGCATAACCAGCGTTTCAGAGAAGATAATCACACAGGGGCTTCTCATGCACAATACCTGGAGGGAGCTGCAAGGGGGCTTAGTGAGAGATGTGATACACATGATGGGAAGTCTTATAGACAACGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCACAGCAATTAGGAAAGGCGAAGATTCATGGTCTCTAGAGCTCAGTGCTGGAGGTCTAGTTAGCGCACTTTTAGGTGTTAAGGAGTTTGAGGCAAGGTGGATAGGGTGGGCTGGCGTCAATGTGCCAGATGAGACTGGACAGAAGGCACTTACTAAAGCTTTGGATGAAAAGAGGTGCATCCCAGTATTTCTTGATGAAGAGATTGTTCACCAATATTATAATGGTTACTGCAACAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCCCAAGAAGATCGCCTTGCTACTACACGGAGCTTCCAGTCTCAGTTTGAAGCATACAAGAAAGCAAACCAAATGTTTGCAGATGTTGTGAACAAGCACTATTTAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTTATGTTTCTTCCAAAATGTTTAAAGGAACATAACAGTAAAATGAAAGTTGGTTGGTTTCTTCACACCCCATTTCCATCTTCTGAAATTCATAGGACACTACCATCACGTTCAGAGCTCCTTCGTGCTGTTCTTGCTGCTGATTTAGTAGGATTTCACACCTATGATTATGCACGCCATTTTGTTAGTGCCTGTACTCGCATTCTTGGACTTGAGGGCACTCCAGAAGGAGTTGAAGATCAGGGGAGATTGACTCGAGTTGCTGCATTTCCGATTGGAATAGACTCTGATCGATTCAGACGTGCACTTGAACTTAATCAAGTGGAGGAACATATCAAAGAATTGGAAAAAAGATTTGAGGGTAGAAAGGTAATGTTAGGTGTTGATCGGCTTGATATGATTAAAGGGATTCCTCAGAAAATTCTGGCATTTGAAAAATTTTTGGAAGAGAACGTTGATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAGTATCAGAAGCTTACAAGCCAGGTCCATGAAATTGTTGGTCGCATCAATGGAAGATTTGGAACATTGACTGCTGTTCCTATACATCATCTGGACCGATCACTTGATTTTCATGCACTATGTGCTTTATATGCTGTTACTGATGTAGCACTGGTCACATCTTTGAGGGATGGGATGAATCTTGTCAGTTATGAATATGTGGCCTGCCAGGATAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCGCAGTCTCTAGGTGGAGGAGCAGTTCTGGTTAACCCGTGGAATGTCACAGAAGTTGCAACCGCAATTGCACAGGCTCTGGATATGTCACCTGGGGAAAGAGAGAAACGTCATAGGCACAATTATGTACATGTAACAACCCACACTGCTCAAGAATGGGCTGAGACTTTTGTAAGTGAACTAAATGATACTGTGGTCGAGGCACAACTGAGGACAAGACAAGTGCCACCTACACTTTCAACCAAGATTACAGTTGAACGCTATCTGCAGTCAAGTAATCGATTGCTTATATTGGGATTCAATGCAACTTTAACTGAACCAGTTGAAAAGAAAGGCGACCAGATTAAGGAAATGGAACTCAAGGTGCATCCAGAATTAAAACGATCATTGACAGCACTTTGTGATGACCCGAAGACCACAATTGTTGTGCTTAGTGGAAGTGGTCGAAATGTCCTATATAACAACTTTAAGGAATACAACATGTGGCTAGCAGCAGAGAACGGGATGTTTTTACGCCCCCCAAAGGGAGAATGGATGACAACAATGCCAGAGCATCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAATACTTCACAGAAAGAACTCCCCGGTCTCATTTTGATTTTGATGAAAGGGAGACCTCTCTTGTATGGAACTACAAATATGCGGATATTGAGTTTGGAAGACTTCAAGCGAGGGATATGTTGCAGCATCTCTGGACTGGTCCAATTTCCAATGCATCAGTTGATGTTGTTCAAGGTAGCCGATCAGTTGAAGTGCGAGCCGTTGGTGTTACGAAGGGAGCAGCTATTGACCGCATCTTGGGTGAGATAGTTCACAGTAAATCCATGATAGCACCAATCGATTATGTTCTGTGTATAGGACATTTTCTATCAAAGGATGAAGATGTTTATTCCTTCTTTGAGCCGGAGCTTCCTTCTAGCAGCGTGGGCGTTGCTCGAGCCAAGACTTCGGAAGCAGTTAAGTTTCCTGCAGAGAGAAGATCATCTCTGAAGATGCCAACCAGTACTAAAACAGGAACAAAATCAGCTCAAAATAAGGCACAAAGGCCAGTGTCAAATTCTGAGAAGAAAACCACAAACCATATATGTAATGCCGCACCAAGGAGGCCAGCACCTGATAAGATCTCCTCATGGAATGTGCTTGACCTCAAGAAGGACAATTACTTCTCTTGTGCCGTTGGCCGAACCCGAACAAATGCTCGCTATGTGCTCGGATCCTCAGATGATGTTGCTGCTTTCCTCAAGGAACTGGCTCGTGCATCTTCTCCTTACTATTTATGA 2805 0.4339 MPGNSKYNGNPSHIPGRVGRLVRDRELRKTGRASHLNESADNNNNNGVTEPFQHNQRFREDNHTGASHAQYLEGAARGLSERCDTHDGKSYRQRLLVVANRLPVTAIRKGEDSWSLELSAGGLVSALLGVKEFEARWIGWAGVNVPDETGQKALTKALDEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYKKANQMFADVVNKHYLEGDVVWCHDYHLMFLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFRRALELNQVEEHIKELEKRFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENVDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEYVACQDKKKGVLILSEFAGAAQSLGGGAVLVNPWNVTEVATAIAQALDMSPGEREKRHRHNYVHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPTLSTKITVERYLQSSNRLLILGFNATLTEPVEKKGDQIKEMELKVHPELKRSLTALCDDPKTTIVVLSGSGRNVLYNNFKEYNMWLAAENGMFLRPPKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFDERETSLVWNYKYADIEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMIAPIDYVLCIGHFLSKDEDVYSFFEPELPSSSVGVARAKTSEAVKFPAERRSSLKMPTSTKTGTKSAQNKAQRPVSNSEKKTTNHICNAAPRRPAPDKISSWNVLDLKKDNYFSCAVGRTRTNARYVLGSSDDVAAFLKELARASSPYYL 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02838 934 Gene3D Glycogen Phosphorylase B; 82 333 - -
Accr1g02838 934 MobiDBLite consensus disorder prediction 18 35 - -
Accr1g02838 934 Pfam Glycosyltransferase family 20 94 559 IPR001830 GO:0003824|GO:0005992
Accr1g02838 934 Gene3D - 681 763 - -
Accr1g02838 934 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 94 559 IPR012766 GO:0003825|GO:0005992
Accr1g02838 934 MobiDBLite consensus disorder prediction 36 51 - -
Accr1g02838 934 MobiDBLite consensus disorder prediction 830 878 - -
Accr1g02838 934 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 341 543 - -
Accr1g02838 934 Gene3D - 615 807 IPR023214 -
Accr1g02838 934 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 87 927 IPR001830 GO:0003824|GO:0005992
Accr1g02838 934 MobiDBLite consensus disorder prediction 1 51 - -
Accr1g02838 934 MobiDBLite consensus disorder prediction 837 869 - -
Accr1g02838 934 CDD HAD_TPP 592 827 - -
Accr1g02838 934 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 86 340 - -
Accr1g02838 934 Gene3D Glycogen Phosphorylase B; 336 543 - -
Accr1g02838 934 FunFam Alpha,alpha-trehalose-phosphate synthase 615 686 - -
Accr1g02838 934 Pfam Trehalose-phosphatase 614 826 IPR003337 GO:0003824|GO:0005992
Accr1g02838 934 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 681 763 - -
Accr1g02838 934 CDD GT20_TPS 94 559 IPR001830 GO:0003824|GO:0005992
Accr1g02838 934 SUPERFAMILY HAD-like 591 926 IPR036412 -
Accr1g02838 934 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02838 Accr-Chr1 65326790 65341036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02838 1 930 Trehalose Biosynthesis Gene Families AT1G78580 76.396 0.0 1448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02838 K16055 - qsa:O6P43_029237 1568.13