LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr1g02827	ATGGGTTCTGATGCAATAATGGGAAGTGGAGACTACCCTCTGCTGAAGGATTTCAGATTGGAAATTGAAGGAAAGGAGGGAACTTTCTCTGTCTGTTTCTGGGTTTATTTAATGAGCTCCACCACATTTCCTGCTACGATTCTCCAACAGGTGCGCTCTGATATCTCAGAAAGTGCTCCCTTTCTTGTTATAAATGACAATAAGAGAATCAACCTTTTGCCCGTTATTCTATTACATGAAGAAGCTCCTAATGTTGGTGATGTCAAATCATGGACAGAAGTTCCACATGCAACTGTAGATATTGAGTTTTCTTTAGAAAAATGGATCCATGTTGGATGCGAGATTACTCCAGATCATATTCAGCTTCAGATTAATGGAGAGATTGTTGGAGCAAAATCTCTGTCTTCCTTATTAAATAAGGAATCCAATTCAAGTCGTTTGAATAAAATTACTTTGACTTATGTCGGTGGTAATGGCAATATTGTTCAGGGTTACATCCACAACTTAAAAGTCTTGCCCTCTGTTTCCTCTATTAAGGATCAACATTTAAAGGATCCTCCTATGAAGTTATCTATTGATGAATTGTCAGCTTCTGAGATTGAAGAAGAAAGTGACGGAGTTTGGAGCATTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGACGTTGTTCTGTCAGATGCCTTTGGCCAGCCTGTAGACAAGGATACTGAGGTTTTTGCTTCACTTTTGTATGCTGATACTGGAGCACCTGTGGAGAATACAACTGACGCAGAAGCACCTCTTTTGGTTAGCTTGGATGGGAATGAATATTCTGCTCATGAAAGACCAAGTAAGCTCTTGCAGGGACGTGCATCATTTAAGCTCAAGATATCTCAGCTTTCATCCAAGTGTGATAATAGGTTGTTCCTCATCCGGTTTTGTCTGCCAAAGTTGGGAAATTATCCTTTTCTTGAGACATCCTCTTGTCCAATTCGATGTATTTCCAGAAGTCGCAGCACAAAATTGTCAACTTTGGTGTGGAAAAGATCAGCTCCTCCTGATGGGTCAATGGAACTTCAAAATGCTGCTGCTCATGAAGCAAAAGTCAGCAGTCCATTGATGAAGCGGTTTAGACTTGGTCATGACAAAATATCTGTATCAGTGAAGGCTGACCGTGCCTCAGAGCATCCCGATGAGGAATGCAATTCTCATGCCAGGACCATCAATCAGGTTGAGAATGGGTGTGCAACAAGCTTGGAAGGTAGACCTGAGAACTTTGATGAAGCAGATAACTCTCCATCTGATTCAGGGAGTATAGGGGAGGGAAATTCACACTCCAAGAATGCAAGAAATCCAATCTCTGATATGTCCATATTCAAATACTGCCTGGCGGACTTAACTGAGAGGTCTCTTATGCTCAAGGAAATTGCTACCTCTGCCTCTGACAAGGAAATTTTGGAATTTGCGTCTCAGGTGTCACACTATTCAGGATGTTCACATTATGGAAACCAAATATCATTTACCAAGAGATTAATAGAAGAAGGAACTCTGGTTTGGAAGAGGCTGACCCAAAACAACTACAGTATTCGGTGGGAGAGTGCAATTTATGAGATTGAGGAACAATTCATGAAGATTGCTCGCTGCAGTTCAAGATCTCTTACACTCCAGGACCTAGAGCTTCTGAGAACAATTTCTGGATGTCAAGAGTATCTAGCGCAAGAGAACTTTGAGAAGATGTGGTGCTGGTTATACCCAGTGGCTTTTACAATTTCAAGGGATTGGATACTCCCACTCTGGAAATCGACATCACCCAAGTGGTTAGAAGGATTCATAACTAAGGAAGAAGCAGAAGCTTCCCTTCAAGGTCCTAGGGGGCTTCAGGAACCTGGGACATTTATACTTCGATTTCCCACCTCGAGAAGTTGGCCCCACCCAGATGCTGGCAGCTTAATTGTGACATATGTTGGAAAAAACTACAAACTTCACCATAGGCTTCTTTCGATTGATCGTATTCATGGCTCTGGAGACAACGGAACCGACTTGAAACCACTACAAGATATGCTCCTGGCAGAACCTGAGTTGTGTAGATTAGGAAGGATAGTAAGAAGTGACTGA	2103	0.4213	MGSDAIMGSGDYPLLKDFRLEIEGKEGTFSVCFWVYLMSSTTFPATILQQVRSDISESAPFLVINDNKRINLLPVILLHEEAPNVGDVKSWTEVPHATVDIEFSLEKWIHVGCEITPDHIQLQINGEIVGAKSLSSLLNKESNSSRLNKITLTYVGGNGNIVQGYIHNLKVLPSVSSIKDQHLKDPPMKLSIDELSASEIEEESDGVWSIVGGKASCRRNFSLDVVLSDAFGQPVDKDTEVFASLLYADTGAPVENTTDAEAPLLVSLDGNEYSAHERPSKLLQGRASFKLKISQLSSKCDNRLFLIRFCLPKLGNYPFLETSSCPIRCISRSRSTKLSTLVWKRSAPPDGSMELQNAAAHEAKVSSPLMKRFRLGHDKISVSVKADRASEHPDEECNSHARTINQVENGCATSLEGRPENFDEADNSPSDSGSIGEGNSHSKNARNPISDMSIFKYCLADLTERSLMLKEIATSASDKEILEFASQVSHYSGCSHYGNQISFTKRLIEEGTLVWKRLTQNNYSIRWESAIYEIEEQFMKIARCSSRSLTLQDLELLRTISGCQEYLAQENFEKMWCWLYPVAFTISRDWILPLWKSTSPKWLEGFITKEEAEASLQGPRGLQEPGTFILRFPTSRSWPHPDAGSLIVTYVGKNYKLHHRLLSIDRIHGSGDNGTDLKPLQDMLLAEPELCRLGRIVRSD	700

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr1g02827	700	PANTHER	SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION	30	691	IPR001217	GO:0003700\|GO:0006355\|GO:0007165
	Accr1g02827	700	SUPERFAMILY	SH2 domain	597	690	IPR036860	-
	Accr1g02827	700	Gene3D	SH2 domain	588	696	IPR036860	-
	Accr1g02827	700	SUPERFAMILY	Concanavalin A-like lectins/glucanases	8	174	IPR013320	-
	Accr1g02827	700	ProSiteProfiles	Src homology 2 (SH2) domain profile.	602	700	IPR000980	-
	Accr1g02827	700	MobiDBLite	consensus disorder prediction	426	446	-	-
	Accr1g02827	700	MobiDBLite	consensus disorder prediction	413	446	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr1g02827	Accr-Chr1	65258562	65264317	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	STAT	Accr1g02827		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr1g02827	-		-	gmx:100803169	1042.34