Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02825 ATGAGCAAGTCTCTGGTTTTAGCCTTTTACATCACCATATGCTGCATTTCTTTTGTCATTTCCAAAATCATCATCTCAATTCTCCTCTACAAAAGATGGAAAAGGAAGCACATGATTTATGAAGAAGCATATCCAGGTGGAAAGATGGTGATATTTAGGTGTTCAGTGCTTCAATCAATGACATCTGATATGGTTTTAAAGAAAACATTGAAACTGAACAACAAGGACATTATTGGATGTGGTGGGTGTGGGACAGTTTATAAACTGCAAATAGATGAAACCACTGCCTTTGCAGTGAAAAGGCTCAATAAAGGAACTGCAGATAGAGAGAGAGGCTTTGAGAGAGAGTTGGAAGCAATGGCAGATATAAAACACCGCAATATTGTGACTCTTCATGGTTACTATACTTCCCCTCATTACAACCTTCTCATATATGAGCTCATGTCTAATGGAAGCTTAGATTCGTTTCTACATGGAGGATCAAAGAACAAGTTGTTTTTGGATTGGCCAGCAAGGTACAGAATAGCCCTAGGTGCTGCTAGGGGAATATCATATCTTCACCATGATTGCATCCCACACATTATCCATAGAGATATCAAGTCAAGTAACATATTGCTGGATCACAACATGGAGGCTCGAGTTTCTGATTTTGGATTGGCCACCTTAATGGAACCTAACAAAACTCATGTTACAACCATTGTGGCTGGAACTTTCGGATACTTGGCCCCTGAATACTTTGATACGGGAAGAGCAACTGTAAAAGGGGATGTTTACAGCTTTGGAGTTGTGTTATTGGAGCTTTTAACTGGGAAAAAACCCTATGATGAAGCGTTCATAGAGGAAGGAAGCAAGCTTGTCACATGGGTGAAGGCTGTGGTTCAAGAGAGGAAGGGGGAGTTAGTTCTGGACAACACATTGGGGTCTTGTCCCATGAAAGAGGTTGATAATGTGTTCAACGTAGCAATGATGTGTCTTGAACCAGATCCTCTCAAGAGGCCAACCATGGCCGAGGTTGTCACCTTGCTGGAGGAAACAAACTTGTTAAAGCAGCTTCCTCCTGATAGTGACATTCTGAAAAATTCAGAGGTCTGA 1092 0.413 MSKSLVLAFYITICCISFVISKIIISILLYKRWKRKHMIYEEAYPGGKMVIFRCSVLQSMTSDMVLKKTLKLNNKDIIGCGGCGTVYKLQIDETTAFAVKRLNKGTADRERGFERELEAMADIKHRNIVTLHGYYTSPHYNLLIYELMSNGSLDSFLHGGSKNKLFLDWPARYRIALGAARGISYLHHDCIPHIIHRDIKSSNILLDHNMEARVSDFGLATLMEPNKTHVTTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPYDEAFIEEGSKLVTWVKAVVQERKGELVLDNTLGSCPMKEVDNVFNVAMMCLEPDPLKRPTMAEVVTLLEETNLLKQLPPDSDILKNSEV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02825 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Accr1g02825 363 SUPERFAMILY Protein kinase-like (PK-like) 58 344 IPR011009 -
Accr1g02825 363 Gene3D Transferase(Phosphotransferase) domain 1 148 353 - -
Accr1g02825 363 SMART serkin_6 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02825 363 FunFam Receptor-like serine/threonine-protein kinase 43 147 - -
Accr1g02825 363 Gene3D Phosphorylase Kinase; domain 1 47 147 - -
Accr1g02825 363 Pfam Protein kinase domain 74 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02825 363 ProSiteProfiles Protein kinase domain profile. 72 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02825 363 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 148 352 - -
Accr1g02825 363 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 10 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02825 Accr-Chr1 65251540 65253861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02825 3 343 Receptor kinase-like Gene Family AT2G35620 46.802 3.00e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Accr1g02825 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02825 - - qsa:O6P43_001114 547.74