Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02766 ATGGCCTGGCAATTGCACATGACTTGGCTGCCGAGTCTTCTTACTCAGAAGCGCAAGACCGATCATCCTGTGGGCCTCAAGAACCTCGGCAACTCCTGCTACCTCAACAGCGTCCTCCAGTGTCTCACCTACACTCCTCCTCTTGCCAATTTCTGTCTTCGAAACCAGCACTCTTCCCTTTGCGATTCTGCTTCGGAGGAAAGGAAGCGGGACTGCCCCTTTTGTCTGCTCGAAAAACAGATTGTTCGTTCTCTGAGAGCGGATATCGCCCAAGACGCTCCGTCGAAGATCCAGGGCTGTCTCAGGATTTTCGCCGAGCACTTTCGTTGTGGTCGTCAGGAGGATGCTCACGAGTTCCTGAGGTACGTTATCGATGCTTGCCACAACACCTGCCTTCGCCTCAAGAAGTTGAAGCGCAAGGGGGGCGATACTGCTGTCAATGGTAACGGCAGCAATACTGTGGTTAAGGAGATATTTGGGGGAGCCTTGCAGAGCCAGGTGAAGTGTCTCTCCTGTGGCTTTGAGTCCAATAAGGTGGATGAGGTTATGGATATCAGTCTTGATGTGTTGCATAGCAATTCGCTTAAGGATGCTATGCAAAAGTTCTTTCAGCCTGAGATTTTAGATGGGAATAATAAGTACAAATGTGACAATTGCAAGAAATTGGTGGCGGCTAAGAAACAAATGTCTATACTTGAAGCCCCTAATGTCCTTGTAATACAACTTAAGAGATTTGAGGGCATAATGGGTGGGAAGATCGATAAGGCTGTTGCATTTGAAGACATTTTGGTGCTTTCTAGCTTCATGTGCAAAACAAGCCAGGATCCAATGCCAGAATACAGGCTCTTTGGTACTATTGTCCATTCTGGATACTCCCCAGAATCTGGCCATTATTATGCTTATATAAAGGATGCTAAGAGCCGATGGTATCGCTGTGATGATTCTTCTGTCTCACTTTCAACCCTGAAAGAAGTTTTGTTGGAAAAGGTTTACATACTTTTTTTTTCTCGCACTAACAAAAGGCCAGTGCCAATTAGAAATGGTTTTGCTTCGAATGGTTCAAGGTCTCATGACTCTCATCACATTAATGGAAGTCAGGCTTCTGAATGTCCAAAATCTGATGCACCAACAAAAGTAGTGCATGCAAAATTAAGTTCTCAACAATCTTCTTGGAAGGACGTGTCTGCAATGTCTAAGACTGATAAGGAGCTTTCTAGCCCACGAATAAAGTTTAATTTTAATGGAAATTCTACTTCCAAAAAAGGCCATGAAAGTTTGAATGGGAAAGTTGATGTTCTGTTGCCTGTGCTAACTAATGGACACGTAAAAGACTCAGTTGCTTTGGAGAATGCTAAGAAAGATTCTTCATCAATCAGGAATGGCTTTGATAAAAATAAAGAAGATGCCGTTGACAACTTAAAAAGGAAGGATCCGTTGTTAACAAATAAAAACAATGGTATTCATTCTGTTGAAAAATATCCTAGAAAGTCAGATGTTATGGATGACACCGGAAGAAGCAGAGCAATATCAGGTAAAGGACCTGACAACTATAAGCTAGAAGGCAATGGTCTCAACAACAAACCTAAATCATTAAATAATAAGAGGAAGGAACCAGCGGCAACGAGCATTTTGCTAGCACATGATGATCAGTCCGAAGCAAGAGTTCAGGAACTGAAAGACATGCTTGAAAAAGAGGCAAAGTCAGTTTTAAGATCATGTGGCTGGACAGATAAGGTGCATGACTTTATGTCTTCCAGAAAGAGGTTACATGCACAAGAAGCAGGAAATTCATCAAGTGAAGATGAAAAAAAGAAGTTGCTAGTAAGTGAAGCCAAGGGGGCTTTCATATCACAAATCCCCGAGTCATTGAAAGAGGATCTGATTGGCCGTCTCCGATTATTTAGCAAAGAAAAGACGCGGCTTGGAAAACTCTGA 1935 0.4295 MAWQLHMTWLPSLLTQKRKTDHPVGLKNLGNSCYLNSVLQCLTYTPPLANFCLRNQHSSLCDSASEERKRDCPFCLLEKQIVRSLRADIAQDAPSKIQGCLRIFAEHFRCGRQEDAHEFLRYVIDACHNTCLRLKKLKRKGGDTAVNGNGSNTVVKEIFGGALQSQVKCLSCGFESNKVDEVMDISLDVLHSNSLKDAMQKFFQPEILDGNNKYKCDNCKKLVAAKKQMSILEAPNVLVIQLKRFEGIMGGKIDKAVAFEDILVLSSFMCKTSQDPMPEYRLFGTIVHSGYSPESGHYYAYIKDAKSRWYRCDDSSVSLSTLKEVLLEKVYILFFSRTNKRPVPIRNGFASNGSRSHDSHHINGSQASECPKSDAPTKVVHAKLSSQQSSWKDVSAMSKTDKELSSPRIKFNFNGNSTSKKGHESLNGKVDVLLPVLTNGHVKDSVALENAKKDSSSIRNGFDKNKEDAVDNLKRKDPLLTNKNNGIHSVEKYPRKSDVMDDTGRSRAISGKGPDNYKLEGNGLNNKPKSLNNKRKEPAATSILLAHDDQSEARVQELKDMLEKEAKSVLRSCGWTDKVHDFMSSRKRLHAQEAGNSSSEDEKKKLLVSEAKGAFISQIPESLKEDLIGRLRLFSKEKTRLGKL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02766 644 SUPERFAMILY Cysteine proteinases 17 337 IPR038765 -
Accr1g02766 644 MobiDBLite consensus disorder prediction 348 376 - -
Accr1g02766 644 FunFam Ubiquitin carboxyl-terminal hydrolase 25 18 340 - -
Accr1g02766 644 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 25 40 IPR018200 GO:0004843|GO:0006511
Accr1g02766 644 CDD Peptidase_C19E 23 336 - -
Accr1g02766 644 MobiDBLite consensus disorder prediction 496 533 - -
Accr1g02766 644 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 24 338 IPR028889 -
Accr1g02766 644 Pfam Ubiquitin carboxyl-terminal hydrolase 24 335 IPR001394 GO:0004843|GO:0016579
Accr1g02766 644 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 280 298 IPR018200 GO:0004843|GO:0006511
Accr1g02766 644 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 25 340 - -
Accr1g02766 644 MobiDBLite consensus disorder prediction 349 372 - -
Accr1g02766 644 Gene3D Cysteine proteinases 17 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02766 Accr-Chr1 64376303 64380939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02766 23 347 Miscellaneous Gene Families AT2G24640 37.160 4.53e-61 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02766 K11855 - gmx:100775539 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02766 1 64376303 64380939 Accr1g02766 1 64376303 64380939 ECH