Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02756 ATGCATATAATGGCGGGCAACGCTCAAGGAGCAATGTCCTATCTTGCTTCCCCTGTCAGTTTAGGTGGTTTTGTTGGAGTGAGTTCCTCCGGGAGGACCCTCTCTATTGGAAGGAGAGTTTCTCTTTCTGGAGCAAACTTTAAAGGTAGAAGGACATGGCGTTGTGTCTCCTTGTCCCTTTGTAGATATTCAGTGACTACAACTGATTTCATACTGGACCAAGGCAATGCAATGTCCCTTGACTCTAACAGTGATAGAGGAAGTACGGGTAATGGAGATAATAATGCTGGTTTTGTCCTTAAGCCACCTCCAAAGCCGGTATTGAAGTCTTCAGAGACCAAGGGTAACTCCATTTTAGGTGCAAATTCCGAAGGATGGGATCCCTCTAAAGCTAAGCAATTTGGTAATGAAAAGTTCGATGATGTTGAGGAAAGGAATAAGGTGATTGAGTCACTTGGAGAGGTATTGGAGAAGGCTGAAAAGCTGGAAAATTCAAAGTTGGACGACAAAAGAAATAATGGACCAGTAAGCAAACCGGCAGTATCTAATACAATCGCTAATCCTAACACTGATAAATTGGCAAACTCAACAGCAAACCAGCAGTCTAGAACTGTGAAGAGCGTATGGCGTAAAGGGGACACAGTTGCTAACATGCCGAAGGTTGTTAAAGAAGTGCCCAAGCCCCAAACTAAGAATGGAGGAGGCAAATCTCAAACTGGGGGTGGAGGTAAGGCGGCATCTCAGTTGCCTACTCCTCCACAAGCTCCTCAGCCACCGTCAAGACCTCAGCCTATGCTACAAGCTAAACCATCTGTAGCCCCCCCACCCATCAAAAAACCTGTTTTGAAGGACAATGGAGCTGCTGGCACACGTGTTAAAGATAAAGAAAGGAAGCCAATTTTGATTGACAAGTTTGCTAACAAGAAAGCAGCAGTTGACCCTATAATTGCTCAAGCTGTTTTAGCTCCTACAAAACCAGGAAAGGGCCCTCCTCCTGGAAAGTTTAAAGATGATTTCCGAAAAAAAGGTGCTCCAGCTGGAAGAGGACCAAGGAGAAGAATAATAGATATTGATGATGTCGATGATATTCCCGGTGCTGCATCAGCAAGAAAAGGGAGGAAGTGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTTCAGGCTGCCAAGGACGCAGCTCCTGTCAAAGTAGAAATTCTTGAGGTCAGTGATAAAGGTATGCTGATAGAGGAGTTAGCCTACAACTTGGCAATCAGTGAAGGTGAAATCCTGGGTTCTCTATACTCCAAGGGGATCAAACCAGATGGGGTGCAAACTCTAGACAAAGATATGGTGAAGATGATTTGTAAAGAGCAAGGAGTGGAAGTCTTAGATACTGATCCTGTTAAAGTTGAAGGATTGGCGAAGAAAAGGGAAATTCTAGATGAAGATGATCTCGACAAACTCAAAGATAGGCCACCTGTTATTACTATCATGGGTCATGTGGATCATGGCAAGACAACTCTTTTGGACCATATTCGGAAGAGCAAGGTAGCTGCTTCAGAAGCGGGTGGGATTACACAAGGAATAGGGGCATATAAGGTTCAAGTTCCTGTTGATGGAAAAATGCTGCCTTGTGTTTTTCTTGACACACCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGAGGAGCAAGTGTAACGGATATTGCTATTATTGTGGTAGCTGCTGATGATGGAATTCGTCCACAAACAAATGAAGCCATTGCTCATGCCAAAGCAGCAGGAGTACCCATAATTATGGCTATAAACAAGATTGATAAAGATGGAGCAAATCCGGACCGAGTCATGCAAGAGCTATCTTCAATTGGTCTAATGCCTGAGGAATGGGGTGGTGACATCCCAATGGTTCAGATAAGCGCCCTTAAAGGGGAGAATATAGATGATCTTTTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCAAATCCTGATAGAAGTGCGAAGGGCACAGTCATTGAGGCTGGTCTGGATAAATCAAAAGGACCATTTGCTACTTTTATCGTGCAGAATGGCACCCTTAAAAGGGGAGACGTAGTAGTTTGCGGAGAAGCTTATGGGAAGGTACGGGCTTTATTTGATGATGTTGGAAAACGTGTTGATTCAGCTACACCCTCTATACCCATACAGGTTATTGGATTGAATAATGTTCCAATTGCTGGTGATGAATTTGAGGTTGTTGACTCCCTTGTTGCTGCCTGTGAAAAGGCAGAGTCCCGTGCTGAATCATTGAGAAATGAGCGTATTTCAGCTAAGGCAGGGGATGGGAAGGTCACCCTCTCTTCTTTAGCTTCTGCAGTTTCGGCAGGAAAGCTTTCTGGATTAGACTTGCACCAACTAAACATTATCTTGAAGGTTGATCTTCAGGGAACCATTGAAGCTATCAGACAAGCCCTACAGGTGCTACCACAAGATAATGTCACCTTGAAGTTTTTGTTGGAAGCAACAGGTGATGTTAGCACCAGTGATGTTGACCTTGCAGTTGCAAGCAAAGCCATTATTTTGGGATTTAATGTCAAAGTATCAGGTTCTGTAAAAAGCTACGCAGAAAATAAGTTTGTGGAGATTAGATCATATAAAGTTATTTATGACCTAATTGATGATGTGCGAAATGCAATGGAAGGACTTCTGGAGCCTGTGGAGGAACAAGTTCAGTTTGGCTCAGCCGAAGTAAGGGCCACTTTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGTATGGTTACAGACGGAAAAGTATCAAAAGACTGTGGCATTCGAGTCATTCGTAGGGGTAAGGTGGTTCACCTTGGAGTGCTTGATTCTTTGAGACGAGTGAAGGAGAGTGTGAAAGAGGTAAGTGCTGGTCTAGAGTGTGGAATTGGTTTAGAAGATTACGATGACTGGGAAGAGGGAGATATTATCGAGGCGTTCAACACGGTTCAGAAGAAGCGAACCCTTGAAGAGGCATCAGCTTCAATGGCTGCCGCAGTAGAAGGAGTAGAGTTGTAG 3033 0.4435 MHIMAGNAQGAMSYLASPVSLGGFVGVSSSGRTLSIGRRVSLSGANFKGRRTWRCVSLSLCRYSVTTTDFILDQGNAMSLDSNSDRGSTGNGDNNAGFVLKPPPKPVLKSSETKGNSILGANSEGWDPSKAKQFGNEKFDDVEERNKVIESLGEVLEKAEKLENSKLDDKRNNGPVSKPAVSNTIANPNTDKLANSTANQQSRTVKSVWRKGDTVANMPKVVKEVPKPQTKNGGGKSQTGGGGKAASQLPTPPQAPQPPSRPQPMLQAKPSVAPPPIKKPVLKDNGAAGTRVKDKERKPILIDKFANKKAAVDPIIAQAVLAPTKPGKGPPPGKFKDDFRKKGAPAGRGPRRRIIDIDDVDDIPGAASARKGRKWSKASRKAARLQAAKDAAPVKVEILEVSDKGMLIEELAYNLAISEGEILGSLYSKGIKPDGVQTLDKDMVKMICKEQGVEVLDTDPVKVEGLAKKREILDEDDLDKLKDRPPVITIMGHVDHGKTTLLDHIRKSKVAASEAGGITQGIGAYKVQVPVDGKMLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIMAINKIDKDGANPDRVMQELSSIGLMPEEWGGDIPMVQISALKGENIDDLLETVMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGTLKRGDVVVCGEAYGKVRALFDDVGKRVDSATPSIPIQVIGLNNVPIAGDEFEVVDSLVAACEKAESRAESLRNERISAKAGDGKVTLSSLASAVSAGKLSGLDLHQLNIILKVDLQGTIEAIRQALQVLPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNVKVSGSVKSYAENKFVEIRSYKVIYDLIDDVRNAMEGLLEPVEEQVQFGSAEVRATFSSGSGRVAGCMVTDGKVSKDCGIRVIRRGKVVHLGVLDSLRRVKESVKEVSAGLECGIGLEDYDDWEEGDIIEAFNTVQKKRTLEEASASMAAAVEGVEL 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02756 1010 ProSitePatterns Initiation factor 2 signature. 945 967 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Accr1g02756 1010 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 790 902 IPR036925 -
Accr1g02756 1010 CDD IF2_eIF5B 486 652 - -
Accr1g02756 1010 FunFam Translation initiation factor IF-2 791 896 - -
Accr1g02756 1010 SUPERFAMILY Translation proteins 898 992 IPR009000 -
Accr1g02756 1010 CDD IF2_mtIF2_II 663 757 IPR044145 -
Accr1g02756 1010 MobiDBLite consensus disorder prediction 81 95 - -
Accr1g02756 1010 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 170 1000 IPR015760 -
Accr1g02756 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 659 IPR027417 -
Accr1g02756 1010 Gene3D Translation factors 897 993 - -
Accr1g02756 1010 MobiDBLite consensus disorder prediction 163 301 - -
Accr1g02756 1010 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 483 656 IPR000795 GO:0003924|GO:0005525
Accr1g02756 1010 MobiDBLite consensus disorder prediction 331 351 - -
Accr1g02756 1010 Gene3D Translation factors 659 775 - -
Accr1g02756 1010 Pfam Translation-initiation factor 2 791 884 IPR023115 -
Accr1g02756 1010 NCBIfam small GTP-binding protein domain 485 646 IPR005225 GO:0005525
Accr1g02756 1010 SUPERFAMILY Translation proteins 659 742 IPR009000 -
Accr1g02756 1010 FunFam Translation initiation factor IF-2 659 777 - -
Accr1g02756 1010 Hamap Translation initiation factor IF-2 [infB]. 7 992 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Accr1g02756 1010 Gene3D - 480 658 IPR027417 -
Accr1g02756 1010 FunFam Translation initiation factor IF-2 480 658 - -
Accr1g02756 1010 Pfam Elongation factor Tu GTP binding domain 488 648 IPR000795 GO:0003924|GO:0005525
Accr1g02756 1010 PRINTS GTP-binding elongation factor signature 555 566 IPR000795 GO:0003924|GO:0005525
Accr1g02756 1010 PRINTS GTP-binding elongation factor signature 487 500 IPR000795 GO:0003924|GO:0005525
Accr1g02756 1010 PRINTS GTP-binding elongation factor signature 539 549 IPR000795 GO:0003924|GO:0005525
Accr1g02756 1010 PRINTS GTP-binding elongation factor signature 591 600 IPR000795 GO:0003924|GO:0005525
Accr1g02756 1010 MobiDBLite consensus disorder prediction 176 208 - -
Accr1g02756 1010 NCBIfam translation initiation factor IF-2 405 994 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Accr1g02756 1010 CDD mtIF2_IVc 902 984 - -
Accr1g02756 1010 Coils Coil 742 769 - -
Accr1g02756 1010 MobiDBLite consensus disorder prediction 322 351 - -
Accr1g02756 1010 MobiDBLite consensus disorder prediction 81 111 - -
Accr1g02756 1010 MobiDBLite consensus disorder prediction 119 138 - -
Accr1g02756 1010 Gene3D - 791 896 IPR036925 -
Accr1g02756 1010 MobiDBLite consensus disorder prediction 251 277 - -
Accr1g02756 1010 MobiDBLite consensus disorder prediction 231 245 - -
Accr1g02756 1010 FunFam Translation initiation factor IF-2 896 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02756 Accr-Chr1 64198173 64205094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02756 462 882 Eukaryotic Initiation Factors Gene Family AT1G76810 29.508 7.26e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02756 K02519 - gmx:100778924 1434.85