Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02750 ATGAGATCGAGCGGTGACAAAGATAAAAATCGAGGCGTCAGCTTGCAATTGAACAACCTCCATCAGCGTCTTCTTCATGCATTGAGCCTAGGCACCAGATATTATGACGAGAAGACAAGCCAATGGAAATGGCAGAGCGCAAACATTGAAGTGCAGAAACAAGTTATACGCTCAATTGATGTGTTTCTTGATTTTGTATCTGGAGATGCACGTGCAGCACATCATACTGTTGCAAAGGATTCGGTTGCTGATATTTTGGGAGCATTATTGTGGATTCTTCAATGCAAAAGTAGACCCTTGTTATGTATGGCAGCAAATGTAGCAGTAAAGTTAGTTTGTGTTTTACCCAATTCAATATTGGAATCTTATATATTAGATCTTGTCTATGTTCTGTCATCCTTGCTATCTTCGCCTTTTGTAGAAGTTGCAATACCCTGCTCTACTTGTTTGAATTTGGTAATTTCAAATTTAAATGCCAGTAGTGCGAAGGCTGTGTGGGAGATGTGTTCACTTTTGGGCTCAATATTGTTGTGGTGGCCTCCGACTCGGTTTCCTGTATGGAATGATGTTAAACTGATAGATACTTTGTCAGATATGCATGCAAGGACAGATATTTCCACCAAACTTGTAATCTTGAAGCTGTACACATCTCTAGCTTTATGTGGATCTGTGGCCAAAAAACTCATAGAGAATGGAGAAATCTTTCTACAAATGGTTGTGCAATCCATGGGAAAATCGTACCCTGATACTGTGAGGATAGAAGGATTTAGGCTTGCTCAATGTCTGTTGAGATCCCAAGAGAATTGTTTGAAAGTGATGGATACATGTGGTGAAGCTCTTGTTGATGCCATAATTTTTGGGATGGAAGAAATCGAGATGCATTCTAGAAAATTTGTAAACAAGAATAGTTCTACATCAGTGGAAGCATGCCGATTGGCTTTAGTAACTCGTTGGGCAGAGGAACACGTCTCATCATTGGACAAACAAATATCCATTGCAAGGGAGGGTTTAAGAACCAATCATAAGCTTTGGGTGAGGGGTTATGTGTGGGACATTCTTGGTTCGCTCGCAATACATTCTGGAGAAAATTTCAACCCTTGTATACATGGAAGTGAGATCTACATCAACTTAATTATCATATGTGCATGCTTAACTTTTGAGGATGTGATTAAGAAATGGTGCCGAATATATCATAAGGAAGTTGATGATAGTATTCAGAGTGAACCAGCATCAAGAGCTGTTCTAATGATGATTTATTCTCCATGTAACTACATTTCATCCCAAGCCAGACTCATATTTTCTAGAACATACTCTGCAGATCATTTCAGAAACTTAGTACATACGCTGGAATATACATCATCACTTGAAAGTTATGGATCCTTTGATAAGATCCAACTTATTATCAACTTGATTGGATTGATCTCTTTTTTAAGTTTACCACATCATCATACACTTGAAAGCAAATACATAAAGAAAGTTGCTTTTATAGCAAAACGATGCTTAGGCAATGATATTGATATATCAAGACTCAGCTTAGCTTCTCATTTGCATGCTACCTTATATGAAAATTCCTGTTGTTGGATGGATGCAGAAGATTGGGAAGGTTCTAATATTCTCTTGTTTTATGCTTTGTGGGGCTTAGCTGAAATGGTTCATCAATCTGCTTCTTTACAAAATAGTTCCCACATATCTATTGTTGCTATTGAATATTTTGGAGCTCAATTGGTTGGCAAACTCATTGAGATTTGCAGTAATGCCTCTCTTGGTCATGGTTTAAGATGGTATGCAGCTCATATTCTTAGTCATTTTGAATTTTATGGCTTTCCAAATGAACTAGCCAAAAGGGTTGGGATATGTCTTGATGAGAAAGAATACGCAGATATTCAACTCTTTCTGGCCAATGGCAATACTTTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCATTGCTCCCTCCTGAACTCTTACTTGTTAAAGAAAAAAGAATCGATGGACAATCCATTAGGGAAGTTCGTTTATCTTCTCATGTTGATTATGAAGCATTAGTGAAGTTGTTGGAGTATGTTTACATGGGATACTTTCGTGCCAGTGAAGAAATTGTAAAGAAGGTGAAAACTCTTGCTAAGCGCTGCAATCTGCAGCTTCTCTTACAAATGCTTCATAGACAAAGTCCAAAGTGGGGCGCATCATTCCCCAGCTTTGACCTCACTTCATCTCTTGTTTCAGCTGGAAGTTGTTTTTGGGATGTTATATTGGAATCCAAACTAGATAAACTTGAAAGATGGACATGCCGTATATGCTCTCATTCAGTTCCACATTTGCATGTTCATAAAGTTATATTGCAGTCCGGCTGTGATTACTTGCAAGGTTTGTTTCGTTCTGGAATGAAAGAAAGTCATTCACAGATCATAAAGGTTCCGATTAGTTGGGAAGCAACAAGAAAGCTTGTGCACTGGTTCTATTCGAATGAGCTACCAAAGCCTCCATGTGGATGTTTGTGGGATAATATGGATGATGAACAAAAACTGTTTAGTTTGGAATCATACGTGGAGCTTTATTGGCTTTCAGAATTCTGGATTTTAGAAGATGTTCAAGAAGCTTGCTGGAATGTGATTGTATCTTGTCTTGATAATGCAAAGCAGTTGTCCATTAAAATACTTAAAATGGCTGGCGACTTCTCTTTGTGGAAATTAGCTGATGTTGCAGCAACTCACTTGGCTCCTTCTTATAGTCAGTTAAGAGATTCTTGTGAGCTTGATGATTTGGATGATGCTCTTGTTCACTTAATTTGTTCTGCTTCTATTCAACTTAGTCAAAATGGATGA 2832 0.3814 MRSSGDKDKNRGVSLQLNNLHQRLLHALSLGTRYYDEKTSQWKWQSANIEVQKQVIRSIDVFLDFVSGDARAAHHTVAKDSVADILGALLWILQCKSRPLLCMAANVAVKLVCVLPNSILESYILDLVYVLSSLLSSPFVEVAIPCSTCLNLVISNLNASSAKAVWEMCSLLGSILLWWPPTRFPVWNDVKLIDTLSDMHARTDISTKLVILKLYTSLALCGSVAKKLIENGEIFLQMVVQSMGKSYPDTVRIEGFRLAQCLLRSQENCLKVMDTCGEALVDAIIFGMEEIEMHSRKFVNKNSSTSVEACRLALVTRWAEEHVSSLDKQISIAREGLRTNHKLWVRGYVWDILGSLAIHSGENFNPCIHGSEIYINLIIICACLTFEDVIKKWCRIYHKEVDDSIQSEPASRAVLMMIYSPCNYISSQARLIFSRTYSADHFRNLVHTLEYTSSLESYGSFDKIQLIINLIGLISFLSLPHHHTLESKYIKKVAFIAKRCLGNDIDISRLSLASHLHATLYENSCCWMDAEDWEGSNILLFYALWGLAEMVHQSASLQNSSHISIVAIEYFGAQLVGKLIEICSNASLGHGLRWYAAHILSHFEFYGFPNELAKRVGICLDEKEYADIQLFLANGNTLSVHGVILAVRCPSLLPPELLLVKEKRIDGQSIREVRLSSHVDYEALVKLLEYVYMGYFRASEEIVKKVKTLAKRCNLQLLLQMLHRQSPKWGASFPSFDLTSSLVSAGSCFWDVILESKLDKLERWTCRICSHSVPHLHVHKVILQSGCDYLQGLFRSGMKESHSQIIKVPISWEATRKLVHWFYSNELPKPPCGCLWDNMDDEQKLFSLESYVELYWLSEFWILEDVQEACWNVIVSCLDNAKQLSIKILKMAGDFSLWKLADVAATHLAPSYSQLRDSCELDDLDDALVHLICSASIQLSQNG 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02750 943 Pfam BTB/POZ domain 621 721 IPR000210 GO:0005515
Accr1g02750 943 Pfam BTB/POZ domain 775 838 IPR000210 GO:0005515
Accr1g02750 943 SUPERFAMILY POZ domain 603 722 IPR011333 -
Accr1g02750 943 Gene3D Potassium Channel Kv1.1; Chain A 746 935 IPR011333 -
Accr1g02750 943 ProSiteProfiles BTB domain profile. 750 831 IPR000210 GO:0005515
Accr1g02750 943 CDD BTB_POZ_ZBTB_KLHL-like 775 827 - -
Accr1g02750 943 ProSiteProfiles BTB domain profile. 626 700 IPR000210 GO:0005515
Accr1g02750 943 SUPERFAMILY ARM repeat 45 428 IPR016024 -
Accr1g02750 943 Gene3D Potassium Channel Kv1.1; Chain A 608 725 IPR011333 -
Accr1g02750 943 SUPERFAMILY POZ domain 775 875 IPR011333 -
Accr1g02750 943 PANTHER OS06G0674800 PROTEIN 321 942 IPR044953 -
Accr1g02750 943 SMART BTB_4 763 878 IPR000210 GO:0005515
Accr1g02750 943 SMART BTB_4 626 730 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02750 Accr-Chr1 64105144 64109692 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr1g02750 BTB 8e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02750 - - mtr:25487018 1153.27