Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02749 ATGAGATCGAGCGGTGACAAAGATAAAAATCGAGGCGTCAGCTTGCAATTGAACAACCTCCATCAGCGTCTTCTTCATGCATTGAGCCTAGGCACCAGATATTATGACGAGAAGACAAGCCAATGGAAATGGCAGAGCGCAAACATTGAAGTGCAGAAACAAGTTATACGCTCAATTGATGTGTTTCTTGATTTTGTATCTGGAGATGCACGTGCAGCACATCATACTGTTGCAAAGGATTCGGTTGCTGATATTTTGGGAGCATTATTGTGGATTCTTCAATGCAAAAGTAGACCCTTGTTATGTATGGCAGCAAATGTAGCAGTAAAGTTAGTTTGTGTTTTACCCAATTCAATATTGGAATCTTATATATTAGATCTTGTCTATGTTCTGTCATCCTTGCTATCTTCGCCTTTTGTAGAAGTTGCAATACCCTGCTCTACTTGTTTGAATTTGGTAATTTCAAATTTAAATGCCAGTAGTGCGAAGGCTGTGTGGGAGGTACTGAAACAAACAGAATGTGTCATTCATATTTTGGGCAATATACACAAATTTGTTGGAGATATGCATGCAAGGACAGATATTTCCACCAAACTTGTAATCTTGAAGCTGTACACATCTCTAGCTTTATGTGGATCTGTGGCCAAAAAACTCATAGAGAATGGAGAAATCTTTCTACAAATGGTTGTGCAATCCATGGGAAAATCGTACCCTGATACTGTGAGGATAGAAGGATTTAGGCTTGCTCAATGTCTGTTGAGATCCCAAGAGAATTGTTTGAAAGTGATGGATACATGTGGTGAAGCTCTTGTTGATGCCATAATTTTTGGGATGGAAGAAATCGAGATGCATTCTAGAAAATTTGTAAACAAGAATAGTTCTACATCAGTGGAAGCATGCCGATTGGCTTTAGTAACTCGTTGGGCAGAGGAACACGTCTCATCATTGGACAAACAAATATCCATTGCAAGGGAGGGTTTAAGAACCAATCATAAGCTTTGGGTGAGGGGTTATGTGTGGGACATTCTTGGTTCGCTCGCAATACATTCTGGAGAAAATTTCAACCCTTGTATACATGGAAGTGAGATCTACATCAACTTAATTATCATATGTGCATGCTTAACTTTTGAGGATGTGATTAAGAAATGGTGCCGAATATATCATAAGGAAGTTGATGATAGTATTCAGAGTGAACCAGCATCAAGAGCTGTTCTAATGATGATTTATTCTCCATGTAACTACATTTCATCCCAAGCCAGACTCATATTTTCTAGAACATACTCTGCAGATCATTTCAGAAACTTAGTACATACGCTGGAATATACATCATCACTTGAAAGTTATGGATCCTTTGATAAGATCCAACTTATTATCAACTTGATTGGATTGATCTCTTTTTTAAGTTTACCACATCATCATACACTTGAAAGCAAATACATAAAGAAAGTTGCTTTTATAGCAAAACGATGCTTAGGCAATGATATTGATATATCAAGACTCAGCTTAGCTTCTCATTTGCATGCTACCTTATATGAAAATTCCTGTTGTTGGATGGATGCAGAAGATTGGGAAGGTTCTAATATTCTCTTGTTTTATGCTTTGTGGGGCTTAGCTGAAATGGTTCATCAATCTGCTTCTTTACAAAATAGTTCCCACATATCTATTGTTGCTATTGAATATTTTGGAGCTCAATTGGTTGGCAAACTCATTGAGATTTGCAGTAATGCCTCTCTTGGTCATGGTTTAAGATGGTATGCAGCTCATATTCTTAGTCATTTTGAATTTTATGGCTTTCCAAATGAACTAGCCAAAAGGGTTGGGATATGTCTTGATGAGAAAGAATACGCAGATATTCAACTCTTTCTGGCCAATGGCAATACTTTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCATTGCTCCCTCCTGAACTCTTACTTGTTAAAGAAAAAAGAATCGATGGACAATCCATTAGGGAAGTTCGTTTATCTTCTCATGTTGATTATGAAGCATTAGTGAAGTTGTTGGAGTATGTTTACATGGGATACTTTCGTGCCAGTGAAGAAATTGTAAAGAAGGTGAAAACTCTTGCTAAGCGCTGCAATCTGCAGCTTCTCTTACAAATGCTTCATAGACAAAGTCCAAAGTGGGGCGCATCATTCCCCAGCTTTGACCTCACTTCATCTCTTGTTTCAGCTGGAAGTTGTTTTTGGGATGTTATATTGGAATCCAAACTAGATAAACTTGAAAGATGGACATGCCGTATATGCTCTCATTCAGTTCCACATTTGCATGTTCATAAAGTTATATTGCAGTCCGGCTGTGATTACTTGCAAGGTTTGTTTCGTTCTGGAATGAAAGAAAGTCATTCACAGATCATAAAGGTTCCGATTAGTTGGGAAGCAACAAGAAAGCTTGTGCACTGGTTCTATTCGAATGAGCTACCAAAGCCTCCATGTGGATGTTTGTGGGATAATATGGATGATGAACAAAAACTGTTTAGTTTGGAATCATACGTGGAGCTTTATTGGCTTTCAGAATTCTGGATTTTAGAAGATGTTCAAGAAGCTTGCTGGAATGTGATTGTATCTTGTCTTGATAATGCAAAGCAGTTGTCCATTAAAATACTTAAAATGGCTGGCGACTTCTCTTTGTGGAAATTAGCTGATGTTGCAGCAACTCACTTGGCTCCTTCTTATAGTCAGTTAAGAGATTCTTGTGAGCTTGATGATTTGGATGATGCTCTTGTTCACTTAATTTGTTCTGCTTCTATTCAACTTAGTCAAAATGGATGA 2802 0.379 MRSSGDKDKNRGVSLQLNNLHQRLLHALSLGTRYYDEKTSQWKWQSANIEVQKQVIRSIDVFLDFVSGDARAAHHTVAKDSVADILGALLWILQCKSRPLLCMAANVAVKLVCVLPNSILESYILDLVYVLSSLLSSPFVEVAIPCSTCLNLVISNLNASSAKAVWEVLKQTECVIHILGNIHKFVGDMHARTDISTKLVILKLYTSLALCGSVAKKLIENGEIFLQMVVQSMGKSYPDTVRIEGFRLAQCLLRSQENCLKVMDTCGEALVDAIIFGMEEIEMHSRKFVNKNSSTSVEACRLALVTRWAEEHVSSLDKQISIAREGLRTNHKLWVRGYVWDILGSLAIHSGENFNPCIHGSEIYINLIIICACLTFEDVIKKWCRIYHKEVDDSIQSEPASRAVLMMIYSPCNYISSQARLIFSRTYSADHFRNLVHTLEYTSSLESYGSFDKIQLIINLIGLISFLSLPHHHTLESKYIKKVAFIAKRCLGNDIDISRLSLASHLHATLYENSCCWMDAEDWEGSNILLFYALWGLAEMVHQSASLQNSSHISIVAIEYFGAQLVGKLIEICSNASLGHGLRWYAAHILSHFEFYGFPNELAKRVGICLDEKEYADIQLFLANGNTLSVHGVILAVRCPSLLPPELLLVKEKRIDGQSIREVRLSSHVDYEALVKLLEYVYMGYFRASEEIVKKVKTLAKRCNLQLLLQMLHRQSPKWGASFPSFDLTSSLVSAGSCFWDVILESKLDKLERWTCRICSHSVPHLHVHKVILQSGCDYLQGLFRSGMKESHSQIIKVPISWEATRKLVHWFYSNELPKPPCGCLWDNMDDEQKLFSLESYVELYWLSEFWILEDVQEACWNVIVSCLDNAKQLSIKILKMAGDFSLWKLADVAATHLAPSYSQLRDSCELDDLDDALVHLICSASIQLSQNG 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02749 933 SUPERFAMILY ARM repeat 45 419 IPR016024 -
Accr1g02749 933 SMART BTB_4 753 868 IPR000210 GO:0005515
Accr1g02749 933 SMART BTB_4 616 720 IPR000210 GO:0005515
Accr1g02749 933 Gene3D Potassium Channel Kv1.1; Chain A 598 715 IPR011333 -
Accr1g02749 933 Gene3D Potassium Channel Kv1.1; Chain A 736 925 IPR011333 -
Accr1g02749 933 SUPERFAMILY POZ domain 593 712 IPR011333 -
Accr1g02749 933 ProSiteProfiles BTB domain profile. 616 690 IPR000210 GO:0005515
Accr1g02749 933 Pfam BTB/POZ domain 611 711 IPR000210 GO:0005515
Accr1g02749 933 Pfam BTB/POZ domain 765 828 IPR000210 GO:0005515
Accr1g02749 933 SUPERFAMILY POZ domain 765 865 IPR011333 -
Accr1g02749 933 CDD BTB_POZ_ZBTB_KLHL-like 765 817 - -
Accr1g02749 933 ProSiteProfiles BTB domain profile. 740 821 IPR000210 GO:0005515
Accr1g02749 933 PANTHER OS06G0674800 PROTEIN 311 932 IPR044953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02749 Accr-Chr1 64105144 64109692 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr1g02749 BTB 7.9e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02749 - - mtr:25487018 1127.85