Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02748 ATGAGATCGAGCGGTGACAAAGATAAAAATCGAGGCGTCAGCTTGCAATTGAACAACCTCCATCAGCGTCTTCTTCATGCATTGAGCCTAGGCACCAGATATTATGACGAGAAGACAAGCCAATGGAAATGGCAGAGCGCAAACATTGAAGTGCAGAAACAAGTTATACGCTCAATTGATGTGTTTCTTGATTTTGTATCTGGAGATGCACGTGCAGCACATCATACTGTTGCAAAGGATTCGGTTGCTGATATTTTGGGAGCATTATTGTGGATTCTTCAATGCAAAAGTAGACCCTTGTTATGTATGGCAGCAAATGTAGCAGTAAAGTTAGTTTGTGTTTTACCCAATTCAATATTGGAATCTTATATATTAGATCTTGTCTATGTTCTGTCATCCTTGCTATCTTCGCCTTTTGTAGAAGTTGCAATACCCTGCTCTACTTGTTTGAATTTGGTAATTTCAAATTTAAATGCCAGTAGTGCGAAGGCTGTGTGGGAGGTACTGAAACAAACAGAATGTGTCATTCATATTTTGGGCAATATACACAAATTTGTTGGAGGTGAAATTCCAATGAAAATTGAATATTTCGAACAGATGTGTTCACTTTTGGGCTCAATATTGTTGTGGTGGCCTCCGACTCGGTTTCCTGTATGGAATGATGTTAAACTGATAGATACTTTGTCAGATATGCATGCAAGGACAGATATTTCCACCAAACTTGTAATCTTGAAGCTGTACACATCTCTAGCTTTATGTGGATCTGTGGCCAAAAAACTCATAGAGAATGGAGAAATCTTTCTACAAATGGTTGTGCAATCCATGGGAAAATCGTACCCTGATACTGTGAGGATAGAAGGATTTAGGCTTGCTCAATGTCTGTTGAGATCCCAAGAGAATTGTTTGAAAGTGATGGATACATGTGGTGAAGCTCTTGTTGATGCCATAATTTTTGGGATGGAAGAAATCGAGATGCATTCTAGAAAATTTGTAAACAAGAATAGTTCTACATCAGTGGAAGCATGCCGATTGGCTTTAGTAACTCGTTGGGCAGGTGATCATCATATTAGGTTTTGGAAGAAAAGAATTGATAGAGTCCTCCTTAATCTTTTGATAGAAAATATTCAAGATTTATCAGAGGAACACGTCTCATCATTGGACAAACAAATATCCATTGCAAGGGAGGGTTTAAGAACCAATCATAAGCTTTGGGTGAGGGGTTATGTGTGGGACATTCTTGGTTCGCTCGCAATACATTCTGGAGAAAATTTCAACCCTTGTATACATGGAAGTGAGATCTACATCAACTTAATTATCATATGTGCATGCTTAACTTTTGAGGATGTGATTAAGAAATGGTGCCGAATATATCATAAGGAAGTTGATGATAGTATTCAGAGTGAACCAGCATCAAGAGCTGTTCTAATGATGATTTATTCTCCATGTAACTACATTTCATCCCAAGCCAGACTCATATTTTCTAGAACATACTCTGCAGATCATTTCAGAAACTTAGTACATACGCTGGAATATACATCATCACTTGAAAGTTATGGATCCTTTGATAAGATCCAACTTATTATCAACTTGATTGGATTGATCTCTTTTTTAAGTTTACCACATCATCATACACTTGAAAGCAAATACATAAAGAAAGTTGCTTTTATAGCAAAACGATGCTTAGGCAATGATATTGATATATCAAGACTCAGCTTAGCTTCTCATTTGCATGCTACCTTATATGAAAATTCCTGTTGTTGGATGGATGCAGAAGATTGGGAAGGTTCTAATATTCTCTTGTTTTATGCTTTGTGGGGCTTAGCTGAAATGGTTCATCAATCTGCTTCTTTACAAAATAGTTCCCACATATCTATTGTTGCTATTGAATATTTTGGAGCTCAATTGGTTGGCAAACTCATTGAGATTTGCAGTAATGCCTCTCTTGGTCATGGTTTAAGATGGTATGCAGCTCATATTCTTAGTCATTTTGAATTTTATGGCTTTCCAAATGAACTAGCCAAAAGGGTTGGGATATGTCTTGATGAGAAAGAATACGCAGATATTCAACTCTTTCTGGCCAATGGCAATACTTTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCATTGCTCCCTCCTGAACTCTTACTTGTTAAAGAAAAAAGAATCGATGGACAATCCATTAGGGAAGTTCGTTTATCTTCTCATGTTGATTATGAAGCATTAGTGAAGTTGTTGGAGTATGTTTACATGGGATACTTTCGTGCCAGTGAAGAAATTGTAAAGAAGGTGAAAACTCTTGCTAAGCGCTGCAATCTGCAGCTTCTCTTACAAATGCTTCATAGACAAAGTCCAAAGTGGGGCGCATCATTCCCCAGCTTTGACCTCACTTCATCTCTTGTTTCAGCTGGAAGTTGTTTTTGGGATGTTATATTGGAATCCAAACTAGATAAACTTGAAAGATGGACATGCCGTATATGCTCTCATTCAGTTCCACATTTGCATGTTCATAAAGTTATATTGCAGTCCGGCTGTGATTACTTGCAAGGTTTGTTTCGTTCTGGAATGAAAGAAAGTCATTCACAGATCATAAAGGTTCCGATTAGTTGGGAAGCAACAAGAAAGCTTGTGCACTGGTTCTATTCGAATGAGCTACCAAAGCCTCCATGTGGATGTTTGTGGGATAATATGGATGATGAACAAAAACTGTTTAGTTTGGAATCATACGTGGAGCTTTATTGGCTTTCAGAATTCTGGATTTTAGAAGATGTTCAAGAAGCTTGCTGGAATGTGATTGTATCTTGTCTTGATAATGCAAAGCAGTTGTCCATTAAAATACTTAAAATGGCTGGCGACTTCTCTTTGTGGAAATTAGCTGATGTTGCAGCAACTCACTTGGCTCCTTCTTATAGTCAGTTAAGAGATTCTTGTGAGCTTGATGATTTGGATGATGCTCTTGTTCACTTAATTTGTTCTGCTTCTATTCAACTTAGTCAAAATGGATGA 3012 0.3765 MRSSGDKDKNRGVSLQLNNLHQRLLHALSLGTRYYDEKTSQWKWQSANIEVQKQVIRSIDVFLDFVSGDARAAHHTVAKDSVADILGALLWILQCKSRPLLCMAANVAVKLVCVLPNSILESYILDLVYVLSSLLSSPFVEVAIPCSTCLNLVISNLNASSAKAVWEVLKQTECVIHILGNIHKFVGGEIPMKIEYFEQMCSLLGSILLWWPPTRFPVWNDVKLIDTLSDMHARTDISTKLVILKLYTSLALCGSVAKKLIENGEIFLQMVVQSMGKSYPDTVRIEGFRLAQCLLRSQENCLKVMDTCGEALVDAIIFGMEEIEMHSRKFVNKNSSTSVEACRLALVTRWAGDHHIRFWKKRIDRVLLNLLIENIQDLSEEHVSSLDKQISIAREGLRTNHKLWVRGYVWDILGSLAIHSGENFNPCIHGSEIYINLIIICACLTFEDVIKKWCRIYHKEVDDSIQSEPASRAVLMMIYSPCNYISSQARLIFSRTYSADHFRNLVHTLEYTSSLESYGSFDKIQLIINLIGLISFLSLPHHHTLESKYIKKVAFIAKRCLGNDIDISRLSLASHLHATLYENSCCWMDAEDWEGSNILLFYALWGLAEMVHQSASLQNSSHISIVAIEYFGAQLVGKLIEICSNASLGHGLRWYAAHILSHFEFYGFPNELAKRVGICLDEKEYADIQLFLANGNTLSVHGVILAVRCPSLLPPELLLVKEKRIDGQSIREVRLSSHVDYEALVKLLEYVYMGYFRASEEIVKKVKTLAKRCNLQLLLQMLHRQSPKWGASFPSFDLTSSLVSAGSCFWDVILESKLDKLERWTCRICSHSVPHLHVHKVILQSGCDYLQGLFRSGMKESHSQIIKVPISWEATRKLVHWFYSNELPKPPCGCLWDNMDDEQKLFSLESYVELYWLSEFWILEDVQEACWNVIVSCLDNAKQLSIKILKMAGDFSLWKLADVAATHLAPSYSQLRDSCELDDLDDALVHLICSASIQLSQNG 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02748 1003 Gene3D Potassium Channel Kv1.1; Chain A 806 994 IPR011333 -
Accr1g02748 1003 SUPERFAMILY ARM repeat 45 455 IPR016024 -
Accr1g02748 1003 ProSiteProfiles BTB domain profile. 686 760 IPR000210 GO:0005515
Accr1g02748 1003 SMART BTB_4 686 790 IPR000210 GO:0005515
Accr1g02748 1003 SMART BTB_4 823 938 IPR000210 GO:0005515
Accr1g02748 1003 PANTHER OS06G0674800 PROTEIN 6 1002 IPR044953 -
Accr1g02748 1003 Gene3D Potassium Channel Kv1.1; Chain A 668 785 IPR011333 -
Accr1g02748 1003 ProSiteProfiles BTB domain profile. 810 891 IPR000210 GO:0005515
Accr1g02748 1003 SUPERFAMILY POZ domain 835 935 IPR011333 -
Accr1g02748 1003 SUPERFAMILY POZ domain 663 782 IPR011333 -
Accr1g02748 1003 CDD BTB_POZ_ZBTB_KLHL-like 835 887 - -
Accr1g02748 1003 Pfam BTB/POZ domain 835 898 IPR000210 GO:0005515
Accr1g02748 1003 Pfam BTB/POZ domain 681 781 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02748 Accr-Chr1 64105144 64109692 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr1g02748 BTB 8.7e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02748 - - mtr:25487018 1241.87