Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02745 ATGGCCACTCTGCTGAATACGGTATCTCCACCTGCAAACCTATCATCAAAAACAAAAGGGAACTGTGGTTTTAGCTTATACTCACAGATTCTAAACATCCGTAGGATTCCCCTCAACAGGGGTTTTCCCAGAATTTTGGCTTCTACCCAAGTGGCTATTTCTTCCAAAGATGCTGTTTTTACTTTGCCCAATTGGAGAGCAGGGAAGAGTGATCCGAAAAGCAAGGAGCTCAGGCTTAATGATGCATTTCTGTATTTAGAGTATATGGTGGGTAGAGGTCACAAACCAGATGTAGCTCAAGCAACCCAGCTCTTGTATGATCTTTGCAAGGTTAACAAGCTGAGGAAAGCTGTTAAAGTGATGGAGATGATGATAGGTTCAGGTATTATACCTTATTCAGCATCCTGTACATATCTGGTCAATCATTTGTGCAATAGAGGAAATGTTGGGCATGCAATGCAATTGGTTAAAAAAATGGAGGAACACGGGTTTCTAGTTAATACTATTACGTATAACACTCTTGTTAAAGGGCTTTGCATGCAGGGAAATTTGAACAAGAGCTTGCAGCTTATAGATAGATTGACAAAGAAAGGATTGGTCCCAAACGCTTTCACATATTCTTTCTTGCTTGAAGCTGCTTATAAGGAGAGGGGAGTCGATGAAGCCATGAAACTTTTAGATGAGATAATTGCTAAAGGTGGGGAGAGTAATTTGATCAGTTACAATGTTATATTAACTGGGTTGTGCAAGGAAGGTAGAACTAAAGAAGCCTTTAAGCTTTTCAGGGAATTGCCTGCAAAGGGGTTTCATCCTAGTGTTGTGAGCTATAACATTTTGCTGAGGAATTTGTGTTATGAAGGGCGGTGGGAGGAGGCGAATGAGCTATTAGCAGAGATGTATGAAGAGGATCAGTCTCCCTCTTTGGTTACCTACAACATATTGATTACTTCTCTTGCCCTCCATGGAAGAATAGCACATGCTTTCAAGGTGTTGGATGAGATGATAAAGTGTGGATTTAAGGCAACTGCCACTAGCTATAATCCAATTATTACTCATCTCTGCAAGGAAGGGAAGGTAGATCTTGTAGTTCAGTGTCTGGACCAAATGATTGTTCGGTACTGTAGTCCTAACGAAGGAACATACAATGCTATTGCTTTGCTTTGTGAGGGCGGGAAAGTGCAGGAAGCATTCTCCATAATTCAAAGCTTGGGTAATAAACAAAACTACCCTATGCATGATTACTACAAAAATGTAATTTGGAGCATGTGTAGGAAAGGGAACACGTATCCAGCCTTTCAAATATTATATGAAATGACAAAGTACGGATTTACGCCAGATTCTAACACTTATTCATCTTTGGTAAGAGGAATGTGTAGGGAAGGAATGTTTGATGGAGCTATTGAGATATTCAGGATTTTGGAAGAAAATGGGCACAGGCCTGATACTGATAATTATAATGCACTTTTACTTGGCCTTTGTAAATCTCATAGAACAGACTTGTCACTGGAGATATTTCAGATGATGATTGATAAAGGATGTATGCCTAATGAAACAACTTATACCATTCTTATTGAAGGGCTTGTTTCAGAAGAAGAAATGGATATGGCAGCCAAGCTTTTGAAAGAGTTGCATCAAAAGGGGGTCCTCAGCGAAAGTAGTGTAGAGAGACTTGTTATGCAGTATGACCTCCAGGATGTGGCATATTAG 1707 0.4001 MATLLNTVSPPANLSSKTKGNCGFSLYSQILNIRRIPLNRGFPRILASTQVAISSKDAVFTLPNWRAGKSDPKSKELRLNDAFLYLEYMVGRGHKPDVAQATQLLYDLCKVNKLRKAVKVMEMMIGSGIIPYSASCTYLVNHLCNRGNVGHAMQLVKKMEEHGFLVNTITYNTLVKGLCMQGNLNKSLQLIDRLTKKGLVPNAFTYSFLLEAAYKERGVDEAMKLLDEIIAKGGESNLISYNVILTGLCKEGRTKEAFKLFRELPAKGFHPSVVSYNILLRNLCYEGRWEEANELLAEMYEEDQSPSLVTYNILITSLALHGRIAHAFKVLDEMIKCGFKATATSYNPIITHLCKEGKVDLVVQCLDQMIVRYCSPNEGTYNAIALLCEGGKVQEAFSIIQSLGNKQNYPMHDYYKNVIWSMCRKGNTYPAFQILYEMTKYGFTPDSNTYSSLVRGMCREGMFDGAIEIFRILEENGHRPDTDNYNALLLGLCKSHRTDLSLEIFQMMIDKGCMPNETTYTILIEGLVSEEEMDMAAKLLKELHQKGVLSESSVERLVMQYDLQDVAY 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 132 166 IPR002885 -
Accr1g02745 568 Pfam PPR repeat 135 164 IPR002885 -
Accr1g02745 568 Pfam PPR repeat 108 129 IPR002885 -
Accr1g02745 568 Gene3D Tetratricopeptide repeat domain 391 565 IPR011990 GO:0005515
Accr1g02745 568 Pfam PPR repeat 305 334 IPR002885 -
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 167 201 IPR002885 -
Accr1g02745 568 NCBIfam pentatricopeptide repeat 239 272 IPR002885 -
Accr1g02745 568 NCBIfam pentatricopeptide repeat 345 378 IPR002885 -
Accr1g02745 568 NCBIfam pentatricopeptide repeat 449 482 IPR002885 -
Accr1g02745 568 NCBIfam pentatricopeptide repeat 135 167 IPR002885 -
Accr1g02745 568 NCBIfam pentatricopeptide repeat 274 307 IPR002885 -
Accr1g02745 568 NCBIfam pentatricopeptide repeat 485 517 IPR002885 -
Accr1g02745 568 NCBIfam pentatricopeptide repeat 309 342 IPR002885 -
Accr1g02745 568 NCBIfam pentatricopeptide repeat 169 203 IPR002885 -
Accr1g02745 568 NCBIfam pentatricopeptide repeat 519 548 IPR002885 -
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 481 515 IPR002885 -
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 342 376 IPR002885 -
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 97 131 IPR002885 -
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 446 480 IPR002885 -
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 237 271 IPR002885 -
Accr1g02745 568 Gene3D Tetratricopeptide repeat domain 184 285 IPR011990 GO:0005515
Accr1g02745 568 Gene3D Tetratricopeptide repeat domain 286 390 IPR011990 GO:0005515
Accr1g02745 568 Gene3D Tetratricopeptide repeat domain 73 183 IPR011990 GO:0005515
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 516 550 IPR002885 -
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 202 236 IPR002885 -
Accr1g02745 568 PANTHER MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE 74 384 - -
Accr1g02745 568 SUPERFAMILY TPR-like 170 400 IPR011990 GO:0005515
Accr1g02745 568 Pfam PPR repeat family 480 528 IPR002885 -
Accr1g02745 568 Pfam PPR repeat family 237 284 IPR002885 -
Accr1g02745 568 Pfam PPR repeat family 167 212 IPR002885 -
Accr1g02745 568 Pfam PPR repeat family 344 383 IPR002885 -
Accr1g02745 568 Pfam PPR repeat family 415 459 IPR002885 -
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 272 306 IPR002885 -
Accr1g02745 568 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 307 341 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02745 Accr-Chr1 64086372 64088078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02745 78 554 Glycosyltransferase AT1G05670 25.367 6.01e-56 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02745 - - gmx:102667121 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02745 1 64086372 64088078 Accr1g02745 1 64086372 64088078 ECH