Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02739 ATGAGCAGCATAAGCATGGTAGAGGCAAAGTTGCCTCCTGGGTTCAGGTTTCATCCCAAAGATGAAGAACTTGTATGTGATTACTTAATGAAGAAGGTGACACACTGTGACTCCTCTCTCATGATTGATGTTGATCTAAACAAGTGCGAACCATGGGACATTCCTGAGGTAGCATGTGTAGGAGGGAAGGAGTGGTATTTCTATACACAGAGAGACCGCAAATATGCCACTGGCCTACGCACCAATCGTGCCACTGCCTCAGGCTATTGGAAGGCCACAGGGAAGGATAGGCCTATCCTTCGCAAGGCCACTCTTGTTGGTATGAGGAAGACTTTGGTGTTCTATCAAGGCAGGGCCCCTAAAGGGAGAAAGACCGAATGGGTCATGCATGAGTTTCGCCTTGAAGGTTCCCTTGGCCCTCCTAGACTTTCCTCAGCCAAGGAGGATTGGGTTTTGTGCAGGGCGTTCCTAAAAAACAAAGATCTTTCAGTGAAACAGAGCATCGCAAACTGCTACGACGACACAGGTTGTTCATCTCTACCTGCATTGATGGACTCTTACATCAGTTTCGATCAACAGGCCCAAGCTCAAACTCATCAGGATGATTACGAGCAAGTGCCCTGCTTCTCCATTTTGTCGCAGATCCACACAAACCCTAACTTCAACCACACAGGCAGTACAAGCATAATGCAGCCAAATTTAGTAGTACCTGTCAAGAACCACAATGTGACCGCCACATACTGCGGAGGAACGACGCCATACGATCTGGATTCGTGTTGCTTGGACCCTAATTTGAACTTCGATGGTGATAGTAGGAAGGTATTGAAAGCATTCGTGGATCAGCTCGCTAAGATCGAGAGAAATCAACAGAGTCAAATTACTACTCTCAGAGGTTCACCAAGCTTAGGGGAAGCAAGTCCTGAGAGCTTTTTATCTGATGTCCGTATGCCAAACTTGTGGAACGCTTTCTGA 972 0.4712 MSSISMVEAKLPPGFRFHPKDEELVCDYLMKKVTHCDSSLMIDVDLNKCEPWDIPEVACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKATLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLEGSLGPPRLSSAKEDWVLCRAFLKNKDLSVKQSIANCYDDTGCSSLPALMDSYISFDQQAQAQTHQDDYEQVPCFSILSQIHTNPNFNHTGSTSIMQPNLVVPVKNHNVTATYCGGTTPYDLDSCCLDPNLNFDGDSRKVLKAFVDQLAKIERNQQSQITTLRGSPSLGEASPESFLSDVRMPNLWNAF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02739 323 SUPERFAMILY NAC domain 2 158 IPR036093 GO:0003677|GO:0006355
Accr1g02739 323 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 215 - -
Accr1g02739 323 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Accr1g02739 323 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Accr1g02739 323 FunFam NAC domain-containing protein 100-like 20 162 - -
Accr1g02739 323 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02739 Accr-Chr1 63979057 63983068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02739 2 321 NAC Transcription Factor Family AT1G56010 56.886 3.13e-119 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr1g02739 NAM 8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02739 - - ahf:112703413 442.195