Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02736 ATGACGTCTTGTTTTTCTTTCTTATTTGGTAGGAAGGTTACATCTTCAGTGATACGAGATCCTGAAATTGATGAAGAATTAGCCGGTATTCACAATGTTATTCTTTATACCTACAAAGAATTAAGTATTGCCACTGAGGATTTCAGTCCAGCTAACAAAGTTGGAGAGGGAGGATTTGGTTCCGTCTACAAGGGAAAGCTAAAAGATGGAAAAATTGCTGCTGTTAAAGTCCTTGCAGCTGAATCAAGTCAAGGGGTGAATGAGTTCTTGACAGAAATCAAAGTGATCTCAGAAATAGAGCATGAAAATTTAGTCAAGTTATATGGCTGTTGTGTGGAAGGCAATCACAGAATATTAGTCTACAATTACCTTGAGAACAACAGTCTAGCACAGACACTTCTAGGTGGACGATGCAGCAATATTTTCTTCGACTGGCAAACACGGGCTAGAATATGCATTGGGATTGCCCGCGGGTTTGCCTTTCTTCATGAGGAAGTAAAACCACATATTGTTCATAGGGATATAAAAGCAAGCAACATTCTCCTTGACAAAGACCTTACACCAAAGATTTCAGATTTTGGGCTTGCAAAGCTTATCCCTGCAAACATGACTCATGTCAGCACACGTGTGGCAGGGACAATAGGTTATCTGGCACCAGAATATGCAGTAAGGGGGCAGGTGAATAGAAAAGCAGACATTTACAGTTTTGGTGTACTTCTTTTGGAGATTGTCAGTGGGAAATGTAATACAAATACACGATTGCCATTGGAAGAACAATTCCTTCTAGAGAGGACATGGAGGCATTATCAGGAAGGGATATTGGTAGGGCTAGTAGACACATCCCTAAATGGGGAATTCGATGCCGAGGAGGCTTGCAAGTTTCTGAAAGTTGGCCTTCTTTGTACTCAGGAAGTTCCTAAGCTCCGGCCATCCATGTCTACGGTGGTCAAGATGCTCACCGGTAAAATGGACGTCTATGACAGTAAGATAACAGAACCAGGCTTGATTTCTGACTTTATGGACCTCAAAGTTGGAGGAAAACCAAAAAATGAAGTTGATATGAAAACATTATCTTCTTATAATACCCCCTCGACCTCGGACAACCAGGACACTACGATGTCGATTGCTTCAACCGCTACTACTACAACCTTTGCCATGCACTATGATCGTAGCATGTAA 1179 0.4156 MTSCFSFLFGRKVTSSVIRDPEIDEELAGIHNVILYTYKELSIATEDFSPANKVGEGGFGSVYKGKLKDGKIAAVKVLAAESSQGVNEFLTEIKVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLLGGRCSNIFFDWQTRARICIGIARGFAFLHEEVKPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAVRGQVNRKADIYSFGVLLLEIVSGKCNTNTRLPLEEQFLLERTWRHYQEGILVGLVDTSLNGEFDAEEACKFLKVGLLCTQEVPKLRPSMSTVVKMLTGKMDVYDSKITEPGLISDFMDLKVGGKPKNEVDMKTLSSYNTPSTSDNQDTTMSIASTATTTTFAMHYDRSM 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02736 392 SMART serkin_6 48 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02736 392 Gene3D Transferase(Phosphotransferase) domain 1 124 332 - -
Accr1g02736 392 CDD STKc_IRAK 54 321 - -
Accr1g02736 392 ProSiteProfiles Protein kinase domain profile. 48 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02736 392 FunFam cold-responsive protein kinase 1 124 335 - -
Accr1g02736 392 Gene3D Phosphorylase Kinase; domain 1 14 123 - -
Accr1g02736 392 FunFam cold-responsive protein kinase 1 19 123 - -
Accr1g02736 392 SUPERFAMILY Protein kinase-like (PK-like) 30 320 IPR011009 -
Accr1g02736 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Accr1g02736 392 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 353 - -
Accr1g02736 392 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Accr1g02736 392 Pfam Protein kinase domain 51 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02736 Accr-Chr1 63943096 63946213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02736 24 325 Receptor kinase-like Gene Family AT1G53430 56.106 9.36e-109 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02736 Pkinase 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02736 - - pcin:129315125 669.463