Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02721 ATGACAGAACAGCATAGTGAAGGTTGTAAAAGGCTTTTATCACTCATGGGGGTGCCTGTTATTGAGGCGCCATCCGAAGCTGAAGCACAGTGTGCTGCACTCTGCAAATCTGGAAAGGTTTATGCTGTGGCTTCTGAAGACATGGATTCATTAACGTTTGGAGCTCCTATATTTCTTCGCCATCTAATGGTTTCTGGCTCAAAGAAAGTTCCAGTTATGGAATTTGAAGTTGCCAAGATATTGGAGGACCTAAATCTGACCATGGATCAATTTATTGACTTATGTATTCTTTCTGGGTGTGATTATTGTGAAAGCATTCGAGGTATTGGTGGCAAGACTGCTTTGAAGCTCATTAACCAGCATAGCTGTATAGAGAACATATTGAAGAACATAAATAGAGAAGTGATGTTGATACAGAGTTTCAAATAG 429 0.4009 MTEQHSEGCKRLLSLMGVPVIEAPSEAEAQCAALCKSGKVYAVASEDMDSLTFGAPIFLRHLMVSGSKKVPVMEFEVAKILEDLNLTMDQFIDLCILSGCDYCESIRGIGGKTALKLINQHSCIENILKNINREVMLIQSFK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02721 142 ProSitePatterns XPG protein signature 2. 17 31 IPR019974 GO:0016788
Accr1g02721 142 Gene3D - 1 89 - -
Accr1g02721 142 Gene3D - 90 142 - -
Accr1g02721 142 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 86 132 IPR036279 -
Accr1g02721 142 SMART xpgineu 14 86 IPR006086 GO:0004518
Accr1g02721 142 FunFam Flap endonuclease 1 86 141 - -
Accr1g02721 142 Pfam XPG I-region 17 101 IPR006086 GO:0004518
Accr1g02721 142 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 10 130 IPR006084 -
Accr1g02721 142 SMART HhH_4 88 121 IPR008918 GO:0003677|GO:0003824
Accr1g02721 142 CDD H3TH_FEN1-Euk 89 134 - -
Accr1g02721 142 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 91 106 IPR006084 -
Accr1g02721 142 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 34 54 IPR006084 -
Accr1g02721 142 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 13 30 IPR006084 -
Accr1g02721 142 SUPERFAMILY PIN domain-like 2 101 IPR029060 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02721 Accr-Chr1 63806403 63807643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02721 1 138 Core DNA Replication Machinery Family AT5G26680 78.986 4.74e-77 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02721 K04799 - zju:107411672 234.187