Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02719 ATGGCCGTTGAAGCTCGCCATCTCCATGTCTTCCCTCCCCAACTCATTGCCAATCGGGAAATGTTGAATCCCATTGAAGCGAATTTCAATCCTTTCAATGCCCAGATCGGCTACTCCTCTGTTCTGCCATTATCCGGTACCACTACTGCCACTGAGACGCCTCTCACGGCCGCCGCGGCTTACAATTCTTTGATCGTCGATTCTGTTCCTCAGAAAACTGCAATGAAATCCGAAAGCGGCCTTACCACCTATAACGTCCCTGTGCCAAGAAAGCGATCGAGGGACTCATCAATCAATTACCCTCTGCTATCCTACCCGGTCAATGCTCAGACTCAAAAGAATTGTGGCTTCTTCTCGTTTCTTGGAGAAGACATTTCTCTCCAGGTTCATCAACAGCAACTTGATGTCGACCGCCTCATTTCCCAGCATATGGAGAAGGTGAGGGTGGAATTAGAGGATAAACGGAAGAAGCAGGCGAGGAGGATAATAGAGGCAATCGAGATTGGGATGATGAAGAGGCTGAAGGCGAAGGAGGAAGAGATAGAAAAGATGGGCAAACTGAACTGGGCTCTGGAAGAACGAGTCAAGTCCCTGTGCGTCGAAAACCAAATATGGCGGGATTTAGCACAGACCAACGAAGCCACCGCCAATGCCCTCCGAACCAACCTCGAGCAAGTATTAGCCCAAATCAAGGACGACCGTACACGCGCAGGCGCTGACGATGACGACAACGAAGATACCACCGTTGCTCCCGCAGGGCCAGCACTATTCCTGGACGACGCCCAATCATGCTGCGGCAGTACAGGCGGTGGCGATGAAGAGGACGACGCAAATGACCACCACCAAAACGAAACAAGACAAGGGACGATGGAAGGGTGTTGGCGCACGGTACCAGCCGGGTGCGCGGTGGTGAAGGATAAGGACGAAGAAGGTACAAGTGGTGGTGGTGGTGGTGGTGGCAGTGAGTGCAGAAGATTGTGCAGGAACTGTGGGAAAGAGGAATCGTGCGTGCTGATCTTGCCGTGCAGGCACCTCTGCCTCTGTACTGTTTGTGGGTCCACCCTTCACACTTGTCCCGTCTGTAAATCCTTCAAAAACGCTAGTGTCCATGTCAACATGTCCTGA 1125 0.5218 MAVEARHLHVFPPQLIANREMLNPIEANFNPFNAQIGYSSVLPLSGTTTATETPLTAAAAYNSLIVDSVPQKTAMKSESGLTTYNVPVPRKRSRDSSINYPLLSYPVNAQTQKNCGFFSFLGEDISLQVHQQQLDVDRLISQHMEKVRVELEDKRKKQARRIIEAIEIGMMKRLKAKEEEIEKMGKLNWALEERVKSLCVENQIWRDLAQTNEATANALRTNLEQVLAQIKDDRTRAGADDDDNEDTTVAPAGPALFLDDAQSCCGSTGGGDEEDDANDHHQNETRQGTMEGCWRTVPAGCAVVKDKDEEGTSGGGGGGGSECRRLCRNCGKEESCVLILPCRHLCLCTVCGSTLHTCPVCKSFKNASVHVNMS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02719 374 ProSiteProfiles Zinc finger RING-type profile. 327 362 IPR001841 -
Accr1g02719 374 Pfam Zinc finger, C3HC4 type (RING finger) 325 363 - -
Accr1g02719 374 Coils Coil 174 194 - -
Accr1g02719 374 FunFam BOI-related E3 ubiquitin-protein ligase 1 303 374 - -
Accr1g02719 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 319 374 IPR013083 -
Accr1g02719 374 MobiDBLite consensus disorder prediction 266 289 - -
Accr1g02719 374 CDD mRING-HC-C3HC5_CGRF1-like 325 362 - -
Accr1g02719 374 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 75 371 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02719 Accr-Chr1 63731655 63732955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02719 307 363 Miscellaneous Gene Families AT4G39050 33.333 2.34e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02719 K19042 - qsu:112024867 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02719 1 63731655 63732955 Accr1g02719 1 63731655 63732955 ECH