Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02711 ATGGGTGGCGAAGAATTGAGGAAGCACGAAGGGAGCTTTATGGAAGAAGAGGATGAAGAAGAAGTAGAACTTCCAGGGTTTCGGTTTCATCCCACAGATGAAGAACTCGTGGGGTTCTATCTTCGAAGGCAGCTTGACAAGAAACCAATCAAGATCGAACTCATCAAGCAGATCGATATCTACAAATACGACCCTTGGGACCTGCCAAAAGCGAGCTGCACAGGAGGGGAGAAGGAGTGGTATTTTTTCTGCAAGAGAGGGAGGAAGTACAGGAACAGTATAAGGCCAAATAGAGTAACGGGGTCAGGCTTCTGGAAAGCCACAGGGATAGACAAGCCGATTGCAGGACAAGGTGGTGAGTGCATTGGCCTCAAGAAGACTCTTGTTTACTACAGAGGCAGTGCTGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTCCCTTCTCTTCATGACTCTGCTGGCCCCACCAACGCCACCGCAGCTGCCGCCGCCAACACCACCATTGCCCAACAAGCTGAAATCTGGACATTGTGTCGAATATTCAAGCGAAATGTTCCACCCAGGAAGCACATAACAGACTGGAGATCATCATCATCATCACTTACCAAACGCCAATATTCTTCAGTCGACAAGAACGCATCAAGCACCGAGGAGATAGATCATACGTCTAACTACTACTCTAATAACAAAGAAGCTTACATAGATTTTGGAGGAAGACATAATCATAATCATCTTGGTCATCAATATGATTCTCAGCTTAATCATCATCATGAGCAGAAACCAGCAGTCTTCAATACTATCAGTGATCAAAGGAACAACAATAATAATAATAATCAGTTCATGATCATGAACTCATCCCAAGCAGCAGCACAACAACAGCCACAGTTCGTTACTCCTTCTTCTTCTAACTTGTGGATTAATAACCCTTCTGCTGCTGCTGCTGGCGCCGCCACCGCCAATGACTTCCTCACGTATGAGAATTGGGATGAACTTGGATCAGTGGTCAGGTTTGCTCTTGATTCCTCTATGATGTAA 1047 0.4565 MGGEELRKHEGSFMEEEDEEEVELPGFRFHPTDEELVGFYLRRQLDKKPIKIELIKQIDIYKYDPWDLPKASCTGGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPIAGQGGECIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSLHDSAGPTNATAAAAANTTIAQQAEIWTLCRIFKRNVPPRKHITDWRSSSSSLTKRQYSSVDKNASSTEEIDHTSNYYSNNKEAYIDFGGRHNHNHLGHQYDSQLNHHHEQKPAVFNTISDQRNNNNNNNQFMIMNSSQAAAQQQPQFVTPSSSNLWINNPSAAAAGAATANDFLTYENWDELGSVVRFALDSSMM 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02711 348 Gene3D NAC domain 32 189 IPR036093 GO:0003677|GO:0006355
Accr1g02711 348 FunFam NAC domain-containing protein 35 32 190 - -
Accr1g02711 348 Pfam No apical meristem (NAM) protein 25 150 IPR003441 GO:0003677|GO:0006355
Accr1g02711 348 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 285 - -
Accr1g02711 348 ProSiteProfiles NAC domain profile. 23 187 IPR003441 GO:0003677|GO:0006355
Accr1g02711 348 SUPERFAMILY NAC domain 22 187 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02711 Accr-Chr1 63658904 63661314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02711 17 187 NAC Transcription Factor Family AT5G39820 59.218 2.05e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr1g02711 NAM 1.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02711 - - gmx:100790471 367.081