Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02707 ATGGCTTCCATACCTCAGTTCTATTCAAACCAGAGTGATTTCACTGACATGATCACCACTGGCAATCAAGTAAATGAAATGATGAGTTCCTCAGTTATGGAAGATAATACAATGTGGGGCGATCAACACCGATATGGTTTTGTTCCATTGCTTGATAACAGTTTTGGTACTGTTCATGATCATCATCATGATCATACTGTGTCCTCATCAGCGTCCATGAATTATTATTCTGATGCATGGTCGACGGCTTTTCCTTTGGAGCACTGGGCCAGTCAGCCGGAAGTTTCAGACCTCCGAACCCCCTACCACCACAGCTTCTATGGCATTAACAATAATGAAGGGTTCCAGAGCTTGTTGAGCGGGGGATTATTATCATACCAACAACCATATAACATTGCTGACTTTGCAGATGAATGTTGTGGCTTTGTGGAAGACATAAAGCCTCTTGCTTGTCCTAATAAAGCTTCAAGAGACAACTGGGGAAATCAACGGAATCAAGTGGTAGCAGTTGATCAAGAGAACATTAAGGTGGGGAGATATTCGGAAGAAGAGAGGAAGGAAAGAATTCTGCGATATTTGAAGAAAAGAAACCAAAGGAACTTCAACAAAACCATCAAGTACGCTTGTCGGAAAACCCTAGCAGATCGGAGAGTGAGAGTGAGAGGAAGATTTGCCAGAAACAACGAGCTGTGTGATGATGAAATGGCAATGAAAAAGAATATTGAGAATCTTCAACAATACGACTTGTATGGTGCTGATGATTCTATTCAATTCCAGTTAAGAAATGAGGAGGAGGATTGGCTGCAAGAAGCCATGGAAAGTCTGGTGTTTGTATCTCATTCTTCCCCAGAAGATATATAA 861 0.4158 MASIPQFYSNQSDFTDMITTGNQVNEMMSSSVMEDNTMWGDQHRYGFVPLLDNSFGTVHDHHHDHTVSSSASMNYYSDAWSTAFPLEHWASQPEVSDLRTPYHHSFYGINNNEGFQSLLSGGLLSYQQPYNIADFADECCGFVEDIKPLACPNKASRDNWGNQRNQVVAVDQENIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCDDEMAMKKNIENLQQYDLYGADDSIQFQLRNEEEDWLQEAMESLVFVSHSSPEDI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02707 286 ProSiteProfiles CCT domain profile. 185 227 IPR010402 GO:0005515
Accr1g02707 286 Pfam CCT motif 185 227 IPR010402 GO:0005515
Accr1g02707 286 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 57 240 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02707 Accr-Chr1 63587590 63589069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02707 181 235 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 2.98e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr1g02707 CCT 9e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02707 - - gmx:102670442 268.47