Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02704 ATGGTTATGATCGACGCTGGATCGACCGCCATGGCCACTTCGCCGTTGAAAAAGATCGAACGCGCCCACCAGCTGTACCGCGACGGACGGTATGGCGACGCGCTAGGTTTCTACACGGAGGCTATTGGGATGGCTAAGACTAAGGCTCAAAAGATTGCTTTGCATAGCAACAGGGCCGCTTGTTATCTGAAGCTTCAAGATTTCAAGAAGGCTGCAGAAGAATGTACCTCAGTGCTTGAGCTAGATTACGAGCACAGTGGAGCACTGATGCTGCGGGCTCAAACACTAGTCACCCTTAAAGAGTACAATTCAGCACTTTTTGATGTCAACCGGCTGCTAGAGATGGATCCATCCTCAGAGGTGTATCAAAATCTTCAAGCTCGCTTAAGGACACAATTGTCACTTGCTCCAATACCAGAGTTAGAAGAGGAGTTTGAGGAACAGGGAGATGATGAAGATGAGGTGACTGTAAAAGGAAATAATAAATGGGAAAAATCTCAAGAGAAAGATGAGCTTGACAAGGCTACCATTACTAATGCTGAAATAGACTCCAGGGTATCATCTGAACAAAGAAGAGAACAAAACTCTGAGCCAAGAACTTCCACGCCAGAGACAATTGCCAAAGCACCACAAGAGGAACCAGCTGAGCAGCATTCCAAAGCATGGCAATCAATTCCAAAACCGAAAGGGCATTCAGCTTTAAACTATGCACGATGGGACAGTGTTGAAGATGATTCAAGTGAAGATGATGACAACGATGATGATGAAGATGAAGAAGAATCTCAGCCCCAGTACAGATTTCGTGTAAGAACCATAGGTGTACGATCGGTAAAGTAA 837 0.4552 MVMIDAGSTAMATSPLKKIERAHQLYRDGRYGDALGFYTEAIGMAKTKAQKIALHSNRAACYLKLQDFKKAAEECTSVLELDYEHSGALMLRAQTLVTLKEYNSALFDVNRLLEMDPSSEVYQNLQARLRTQLSLAPIPELEEEFEEQGDDEDEVTVKGNNKWEKSQEKDELDKATITNAEIDSRVSSEQRREQNSEPRTSTPETIAKAPQEEPAEQHSKAWQSIPKPKGHSALNYARWDSVEDDSSEDDDNDDDEDEEESQPQYRFRVRTIGVRSVK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02704 278 Gene3D Tetratricopeptide repeat domain 16 174 IPR011990 GO:0005515
Accr1g02704 278 SMART tpr_5 86 119 IPR019734 GO:0005515
Accr1g02704 278 SMART tpr_5 15 48 IPR019734 GO:0005515
Accr1g02704 278 SMART tpr_5 52 85 IPR019734 GO:0005515
Accr1g02704 278 MobiDBLite consensus disorder prediction 143 278 - -
Accr1g02704 278 MobiDBLite consensus disorder prediction 243 260 - -
Accr1g02704 278 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 11 278 - -
Accr1g02704 278 MobiDBLite consensus disorder prediction 154 178 - -
Accr1g02704 278 Pfam Tetratricopeptide repeat 66 129 - -
Accr1g02704 278 SUPERFAMILY TPR-like 19 132 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02704 Accr-Chr1 63550919 63553215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02704 17 133 Calmodulin-binding Proteins AT3G25230 34.884 1.25e-14 71.6