Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02689 ATGGGAAAAGGAAGAGCTCCTTGCTGCGATAAGAACATAGTGAAGAGAGGACCTTGGAGCCCTCAAGAAGACCTTAAGCTCATTACCTTCATCCAGAAACATGGTCATCAGAATTGGCGTTCCCTCCCTAAGCAAGCTGGGCTTCTTCGATGTGGAAAAAGCTGTCGTCTGAGATGGATAAACTACCTAAGGCCTGATTTGAAGAGAGGCAAGTTCACAAAAGAAGAAGAAGAGACCATAATGAAGCTGCATGAGACCTTGGGAAACAAGTGGTCAAAAATTGCATCCGAGTTGCCAGGTAGAACAGACAATGAGATCAAGAATGTGTGGCACACCCACTTGAAGAAGAAATTATTATTGAAGAACAGTTTGGATAATAATAACAACCCGTCCACCATTATTGATCAATCCAATAGTAAGCAAGAATCTTCATGCATAACCTCTTCCTCTTCATCTTCTACCTCAACTAGACACCAAGAAGGGACAACATCATCAATTCCTCAGAAGAAAACTACAGACAATACTAATGAGCAAAATTCCGAAAATGTCAATAAAGAGTGTTATACTACTGATCAATCATCATCAGCACCAGCTATCTGTAAATTACAAGAGGATCATCATCAGATGGAACTAGTCGCAGCAGGTTCTTCGTTATGGTATCAAGGAGCAGGGCCAGATGATAATAATGATAATAATACAGTAGTAGTACTAAACGAGGTTGTTGTTGACAAGCCAACTAATAATAATAATAATAACACCAGCAGTGATGGTTTGTTTGAAATACCATTGGAGGCTGACGATGATTTTTGGAACATGCTGGATGATGACAACATAGGAGCTGGAGAAACTGAAACAATGAAGTACTGGATCAGGGAGATAGAGAAGGATCTTGGATTGGAACCTCAGGCATCATCATCATCTCTTGATCTAACCATAGGATTGTCTGATGATATGGACATATGGCCTAATAATGGTAGTTCTGATGGCTTGAGTCTATTAATTAAGGATTTTGTTCATAATTTCTAG 1026 0.3967 MGKGRAPCCDKNIVKRGPWSPQEDLKLITFIQKHGHQNWRSLPKQAGLLRCGKSCRLRWINYLRPDLKRGKFTKEEEETIMKLHETLGNKWSKIASELPGRTDNEIKNVWHTHLKKKLLLKNSLDNNNNPSTIIDQSNSKQESSCITSSSSSSTSTRHQEGTTSSIPQKKTTDNTNEQNSENVNKECYTTDQSSSAPAICKLQEDHHQMELVAAGSSLWYQGAGPDDNNDNNTVVVLNEVVVDKPTNNNNNNTSSDGLFEIPLEADDDFWNMLDDDNIGAGETETMKYWIREIEKDLGLEPQASSSSLDLTIGLSDDMDIWPNNGSSDGLSLLIKDFVHNF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02689 341 SMART sant 68 116 IPR001005 -
Accr1g02689 341 SMART sant 15 65 IPR001005 -
Accr1g02689 341 CDD SANT 71 113 IPR001005 -
Accr1g02689 341 Gene3D - 15 68 - -
Accr1g02689 341 SUPERFAMILY Homeodomain-like 15 110 IPR009057 -
Accr1g02689 341 MobiDBLite consensus disorder prediction 125 183 - -
Accr1g02689 341 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Accr1g02689 341 CDD SANT 18 63 IPR001005 -
Accr1g02689 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Accr1g02689 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Accr1g02689 341 Gene3D - 71 118 - -
Accr1g02689 341 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Accr1g02689 341 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Accr1g02689 341 FunFam Transcription factor RAX3 9 69 - -
Accr1g02689 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 218 - -
Accr1g02689 341 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02689 Accr-Chr1 63419728 63422283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02689 1 177 MYB Transcription Factor Family AT1G56160 64.324 2.30e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g02689 Myb_DNA-binding 7.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02689 K09422 - csv:101202999 247.284