Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02683 ATGAAGTTAGGAGTTAATCACAAAACTCACCAATTTTGGTCTGTCACAGCCTCTCTTTCTGATACATCCCCAGCTTCAGGTTCCTTCACACTTGAGTGGGAACCAAGAATAAAGCAATTGATCATTAAAAGACAAGGGCAGATATATTGGATGAGTGGGGTGTTGAAGAACAAGAGATTTGTGAACATACCAGAACAAGTTCAGAAGTTTTATGAATACAGCATTGTCTCAAACGAGGGGGAAGATTCTTTTAGTTTCAGAAGCAAATATGGTGATGAATCACAGTGGGTGCTGTTTCATAATGGTAGGTTATTGGAAACAAGAGGGGGTGATTTTATCATTGCTAGTGCTGATACTTGCTATGGCTATAACAGTGAAGGTGGCTGTCAAAAATGGGAATCACCCAAATGTAGAAAACCTGGTGAAAAATTCCAAATCCAGTTTCAATTTATGGTTGCTCCATCTGGGAATGATAGTTTTTCTGTGGTGGACAAAAACATTAGTATTGGTGAAAGTGATTGCAAGGCTTCTTGCTGGATCAACTGTACCTGCTTTGCCTTCAAAACGCTTTTCTCCAATGGAACTGGATGCATATATTACCATGGACATTGGAGAACGGAGAAGATTGACTCTAGGGATGAAAGCATTAACATCTTAGTGCCATCAACTCACGACTCAGATCATAAAGATTTGAAGTGGAAAATAATTGGTCTTACCGTGGCAGCAGCTCTGATCACAATCTGCCTTGGAATTTTCTACTTAAGTAGGTGGAGAAAAGCAAGTGAAGTTCAAGAAAATGGAGGAAGAAGCAGAGAGGAGACTGAACTTCTCAACTTAGTATCCTTTGATAGACATACCACTGTTAATGAACTTAAAAAAGATGTAAAAAAGGGGAATTTAAAAATCTTCAACTATGAATCAATCATGGAAGCAACAAACAGGTTCTCACCAGAGAACTTGGTGGGCAAAGGAGGCTTTGGACCTGTATATAAGGGATTATTGCCAATGGGAGAACAAATAGCCATAAAAAGACTTTCAAGAGGTTCATCACAAGGAGCAATTGAGTTTAAGAATGAACTAATTTTGATAGCTGAACTCCAACATGTGAATCTCGTTCAGCTGTTAGGTTGCTGCATCCATGAAGAAGAGAGGATGTTAATCTATGAGTTCATGCCTAACAAAAGCTTGGACTTCTTTCTATTTGATTCTACTCATAGCAAGTCGCTAGGTTGGAAAAGGCGATTCAACATAATTGAGGGGATCATTCAAGGATTGCTCTATCTCCACAAATATTCAAGACTGAAAATAGTTCATAGAGATTTGAAAGCTAGTAACATTCTTCTTGATGATAACATGAATCCTAAAATTTCAGATTTTGGTTTGGCCAAGATTTTTACACAAGAATCAAATGTACAGACCAAACGGATTGTAGGGACATATGGATACATGTCACCTGAGTATGCCATGGAAGGGATTTTCTCCACGAAATCAGACATCTATAGTTTTGGAGTATTAATACTTGAAATCATAAGTGGTAGAAGAAATAACAGTTTCCACAATTCCCAAGGTCCACTAAATCTAGTAGGTCAGGTTTGGAAACTATGGAAGGAAGGTAAAGTTCTAGACATAGTTGATCCAACCTTGAGAGAACAATGTGAACCAGACCAAGTATCAAGATGTGCCCACATTGGACTTTTATGTGTAGAAGAAAATGCAGAAGATCGTCCAGCTATGTCAGATGTTATAACCATGTTGGCTAGTGAAACTGCTTCGCTTCCTTTCCCAGCAAGGCCAGCATTTTGTAGTGGAAGAAGAAAGCTAAAAAAGAAATATCATCCTGGTGATTTTGAAACTCATTCTGTGAATGGTTTGTCTATTTCAACCATAAAAGCAAGATAG 1899 0.3828 MKLGVNHKTHQFWSVTASLSDTSPASGSFTLEWEPRIKQLIIKRQGQIYWMSGVLKNKRFVNIPEQVQKFYEYSIVSNEGEDSFSFRSKYGDESQWVLFHNGRLLETRGGDFIIASADTCYGYNSEGGCQKWESPKCRKPGEKFQIQFQFMVAPSGNDSFSVVDKNISIGESDCKASCWINCTCFAFKTLFSNGTGCIYYHGHWRTEKIDSRDESINILVPSTHDSDHKDLKWKIIGLTVAAALITICLGIFYLSRWRKASEVQENGGRSREETELLNLVSFDRHTTVNELKKDVKKGNLKIFNYESIMEATNRFSPENLVGKGGFGPVYKGLLPMGEQIAIKRLSRGSSQGAIEFKNELILIAELQHVNLVQLLGCCIHEEERMLIYEFMPNKSLDFFLFDSTHSKSLGWKRRFNIIEGIIQGLLYLHKYSRLKIVHRDLKASNILLDDNMNPKISDFGLAKIFTQESNVQTKRIVGTYGYMSPEYAMEGIFSTKSDIYSFGVLILEIISGRRNNSFHNSQGPLNLVGQVWKLWKEGKVLDIVDPTLREQCEPDQVSRCAHIGLLCVEENAEDRPAMSDVITMLASETASLPFPARPAFCSGRRKLKKKYHPGDFETHSVNGLSISTIKAR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02683 632 ProSiteProfiles Protein kinase domain profile. 315 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02683 632 CDD STKc_IRAK 321 585 - -
Accr1g02683 632 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 280 390 - -
Accr1g02683 632 Pfam PAN-like domain 159 202 IPR003609 -
Accr1g02683 632 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 391 593 - -
Accr1g02683 632 Gene3D Phosphorylase Kinase; domain 1 278 390 - -
Accr1g02683 632 Pfam Domain of unknown function (DUF3403) 587 632 IPR021820 GO:0004674
Accr1g02683 632 Pfam Protein tyrosine and serine/threonine kinase 319 585 IPR001245 GO:0004672|GO:0006468
Accr1g02683 632 SUPERFAMILY Protein kinase-like (PK-like) 300 605 IPR011009 -
Accr1g02683 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Accr1g02683 632 SMART serkin_6 315 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02683 632 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 208 629 - -
Accr1g02683 632 Gene3D Transferase(Phosphotransferase) domain 1 391 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02683 Accr-Chr1 63375858 63378814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02683 303 609 Receptor kinase-like Gene Family AT4G11530 55.987 6.04e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02683 PK_Tyr_Ser-Thr 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02683 - - qsa:O6P43_029362 715.301