Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02679 ATGATTCGGCTTCTATTAACGGTCTCACGTCGTTTTCGGCCTTCCTCTAGAGAAATTGCTGCTAAACCCTCGCAAGCATTTACTTCCGCCACCTGTTCGACTAAATGCCTAGCCCAAGTCACAGAGGTAGAGGAAGACACTACAGCTCAATCAACTGACCCAGTTCAAGTTTTCAGGAAATGGGGTTGTAATTATGATGATTTGGATAGGATTTTTAAACGTAACCCACAATTGCACAAAGCTGATGTTACCCTGCTTCAATCAAATCTCTCTGTTCTTAGTCGCTTGGGGCTAGAAGCACCTGACTTGGTGAGGATCATCAATTGTAGGCCTAGGTTTCTTCTTAGTAGTCGGGTTCATCGTCATTTTGATGAGAGGTTTCCATATCTTGATTCCTTGTTTGAGTCGAAGGAACTGCTTAAGAGAGCCGTCGTGACTAACCCTTCACTCCTATTCTACGATTTTAACAAAATCATTAAACCTGCTCTTGCACAATACGAAGAATTGGGTGTAGACAAAGAAGATTTTCTTGCCTTGATCTGTACCCGGCCCACGATTATTATAAGGACTTCGTTTGATGAGGAGAAGCTTGAATATATACGCAAGACAGGGCTTTCCCAGGATTCGAAGTTGTATAAATATGCGGTTGCAATAATCGGGGTATCTCGTGTGGAAACAATTCGTGAGAAGTTATCAAATCTTGCCAACTTTGGGTTCTCTGATGATGAGATATTTTATCTTATTGGGCGGTCTCCTCTTGTCTTGACGCTATCAATCGAAAAGGTTCAGAGGAATATGACTTTCATACTGACCACAATGAAGTTTGATGCTAAAACAGTTCTTGAAATCCCTCGTCTCCTGTTGATAAATCTGGATACATTGATGAAGCCACGAGTTCTCCTAATGAGGAAGTTACAAGACATGGATGGTGAGTTAGAATTTACACCAAGTTCTATAATTCGTGCTGTGAGGATGAAGGAGCATAGGTTTGTACAGTTGTTCATTGAAAGCCAGCCTGGGCAAATTGCCGATGAGTTAATGGAGTTCTATAAGAAAGCTAAAGAATTTAAGAGATTAGCGGGGTTGAGAAAGAAGTTTGTTCAAAAAGGCTTTCCATTTTGA 1122 0.4118 MIRLLLTVSRRFRPSSREIAAKPSQAFTSATCSTKCLAQVTEVEEDTTAQSTDPVQVFRKWGCNYDDLDRIFKRNPQLHKADVTLLQSNLSVLSRLGLEAPDLVRIINCRPRFLLSSRVHRHFDERFPYLDSLFESKELLKRAVVTNPSLLFYDFNKIIKPALAQYEELGVDKEDFLALICTRPTIIIRTSFDEEKLEYIRKTGLSQDSKLYKYAVAIIGVSRVETIREKLSNLANFGFSDDEIFYLIGRSPLVLTLSIEKVQRNMTFILTTMKFDAKTVLEIPRLLLINLDTLMKPRVLLMRKLQDMDGELEFTPSSIIRAVRMKEHRFVQLFIESQPGQIADELMEFYKKAKEFKRLAGLRKKFVQKGFPF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02679 373 SMART mt_12 277 309 IPR003690 GO:0003690|GO:0006355
Accr1g02679 373 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Accr1g02679 373 SMART mt_12 209 240 IPR003690 GO:0003690|GO:0006355
Accr1g02679 373 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Accr1g02679 373 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Accr1g02679 373 PANTHER CGI-12 PROTEIN-RELATED 23 337 IPR003690 GO:0003690|GO:0006355
Accr1g02679 373 Gene3D Transcription termination factor 3, mitochondrial 38 116 IPR038538 -
Accr1g02679 373 Gene3D Transcription termination factor 3, mitochondrial 117 344 IPR038538 -
Accr1g02679 373 FunFam Mitochondrial transcription termination factor family protein 123 344 - -
Accr1g02679 373 Pfam mTERF 56 132 IPR003690 GO:0003690|GO:0006355
Accr1g02679 373 Pfam mTERF 115 330 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02679 Accr-Chr1 63345965 63347086 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr1g02679 mTERF 3.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02679 K15031 - qsa:O6P43_001216 399.823