Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02678 ATGCTTCGTCTTTCACGTTGTTTTCTGCTTTTTTCGACTCCAAAACCTTCGCAAGTATTCACTTCTGCCACCTGTTCGACCCAATGTCCAGCCCAAGTTGAAGAGGCAGCTAAAAATACTACAGATCAACCAACAGACGCTATTCAGGTTTTCATGGAATGGGGTTGTAACGATGACGATTTGGCGAAAATTTTAAAGCGAAACCCATATTTGCGCAATTCCGACGCTGCGCTGCTCCAGTCAAAGCTCGCTCTGCTAAGTCGCTACGAGCTAAAGGCGCCTGACCTGGTGAGGATGATCAATTGTAGGCCTAGGTTTCTTAGCTCTCGGATTAATCATTATTTTGAAGAGAGGCTTGCATTTCTTAGTTCCTTGTTTGAGTCCAAGGCTTTTCTTAAGAGAGCCCTTATGGCGAACCCTTCACTGCTAAACTATGATTTTAACAAAACCATTAAACCTGTTCTTGCACAATATGAAGAGTTGGGTGTAAGCAAATATGACTTCCTTTTCATGACCTGTTCCCGGCCCACACTTATTTCAAGGACTTCTTTCGATGAGGAGAAGCTGGAATATATACGCAAGACTGGGCTATCCCCTGCTTCAAAGAGGTATAAATTTGTTGTATCAATAATTGGTGTCTCTCGTCTGGAAACAATTGGTGAGAAGATAGCAAATTTTGCCAAATATGGTTTCTCTGAGGAAGATATATTTAAGTTTATTGGGCGCTCTCCTTTTGTCTTGTTACTATCGATTGAAAAGGTTCAGAGGAATATGACGTTTGTATTGAGCACAATTAATTTGGAAGCGAAAATAGTACTTGATCATCCACATCTCTTGTATTTAAACCTAGATACCAAATTGAAACCACGGTTTCTCCTGTTGAGGAAGATTGAAGACATGGATTTTAAGTCAAAATGTCCACAACTTTCAGTGGTTAGTGCTATGAGGATGAAAGAAAAGAGGTTCCTGAAGGCATTCATTGAATGCCACAGTAAGGAGGTTGCCGATGAGTTATTGGAGTTCTATATGAAGGCAAAGGAAGTGAAGAGACTAGCAGAATCGTCAAGGAAGTGTGTACGTGTAGGATTCCCATTTTGA 1098 0.4098 MLRLSRCFLLFSTPKPSQVFTSATCSTQCPAQVEEAAKNTTDQPTDAIQVFMEWGCNDDDLAKILKRNPYLRNSDAALLQSKLALLSRYELKAPDLVRMINCRPRFLSSRINHYFEERLAFLSSLFESKAFLKRALMANPSLLNYDFNKTIKPVLAQYEELGVSKYDFLFMTCSRPTLISRTSFDEEKLEYIRKTGLSPASKRYKFVVSIIGVSRLETIGEKIANFAKYGFSEEDIFKFIGRSPFVLLLSIEKVQRNMTFVLSTINLEAKIVLDHPHLLYLNLDTKLKPRFLLLRKIEDMDFKSKCPQLSVVSAMRMKEKRFLKAFIECHSKEVADELLEFYMKAKEVKRLAESSRKCVRVGFPF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02678 365 Gene3D Transcription termination factor 3, mitochondrial 111 341 IPR038538 -
Accr1g02678 365 Pfam mTERF 49 165 IPR003690 GO:0003690|GO:0006355
Accr1g02678 365 Pfam mTERF 121 322 IPR003690 GO:0003690|GO:0006355
Accr1g02678 365 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Accr1g02678 365 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Accr1g02678 365 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Accr1g02678 365 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Accr1g02678 365 PANTHER CGI-12 PROTEIN-RELATED 23 331 IPR003690 GO:0003690|GO:0006355
Accr1g02678 365 FunFam Mitochondrial transcription termination factor family protein 115 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02678 Accr-Chr1 63332271 63333368 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr1g02678 mTERF 6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02678 K15031 - jre:108984133 404.445