Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02676 ATGGCAATTCCTCTAAGCTCTTACTTCAATAGGGAAAACTCTTTCCAAACACTATTGAACGAACCAGAAATGATGAGCAGTTACTGTCCCTTCTTCCATGAAGAAACACCACCACAACTACCACCACCAGATTTTTCTGAAAGTTTCTTGTTCCTTAATGATAATAATGCAAACAATTTACTGTTTGATGATTATTATTCATTCCCTGCAGAACTAACCTACCCTTCTCCTCCTCTGCCTCAATGTCAAACACCATCACTACCGCTCTCTCACTATAATAACAACATTAACATCTTCCCCGTCACTGATGATGATCAGACCTTTCAATGTCTTTACCCTAAACGTCGCAAGTTAAGCTTTGAAAATAATTATCATCAGATACCATATCACAGTCATAATCATTTCTATGATGGGGTTGATCAAGATAATATTTTTACCTTGTCTTCTTCCTGCTTAATGCCGGAGTTTAATAATCATAATATCGGAGTTCCGCCACTTCCACCAGTGCAGCCTCCGGTATCACCACAGAGTGTGGCAGCCAGAAAGAGGAGGAAGAAGATAGCAGAGAAGACAGTGGAGCTGGGGAAGATGGTGCCAGGAGGGAATGAGATGAACACAGCTGACATGCTTGTTGCTGCTTCCAAGTATGTCAAGTACTTGCAAGCCCAAGTCTCCATGCTTCAGCTCATGAACAACACACCCACGGAAGATAAAGCAGCAAGTTGGAGTGATAATCAAAATCAGCATTTACAAGCCATGCTTGGCAGTGAAAGGGTCGAAGAGAAGCTCTATTTACAGGAAAAGTGCATAGTCCCACAACATTTGATCACCACCCTCACAAATCATGCTGATATCCAAACAAAACCTTCCATTCTCAAAGATCTGAACCAGTTGATCATTGTCTCAGACCCTGAGAAGAAACAGCTCTAG 930 0.4172 MAIPLSSYFNRENSFQTLLNEPEMMSSYCPFFHEETPPQLPPPDFSESFLFLNDNNANNLLFDDYYSFPAELTYPSPPLPQCQTPSLPLSHYNNNINIFPVTDDDQTFQCLYPKRRKLSFENNYHQIPYHSHNHFYDGVDQDNIFTLSSSCLMPEFNNHNIGVPPLPPVQPPVSPQSVAARKRRKKIAEKTVELGKMVPGGNEMNTADMLVAASKYVKYLQAQVSMLQLMNNTPTEDKAASWSDNQNQHLQAMLGSERVEEKLYLQEKCIVPQHLITTLTNHADIQTKPSILKDLNQLIIVSDPEKKQL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02676 309 Gene3D - 174 234 IPR036638 GO:0046983
Accr1g02676 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Accr1g02676 309 CDD bHLH_AtbHLH_like 179 228 IPR045239 -
Accr1g02676 309 SMART finulus 177 226 IPR011598 GO:0046983
Accr1g02676 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 231 IPR036638 GO:0046983
Accr1g02676 309 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 174 273 IPR045843 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02676 173 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 45.312 2.78e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02676 - - pcin:129316727 310.842