Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02673 ATGGACCCTAGATATGATGGCTTTCAGCCTGTGTCAGAGTCTGTAATGCAGGACCATCTGGATGGCATGCATACTAGTAGGGGGCCGCATGCCCCTAATAAATCTGAAGTTAAACCTGTACTTAATTATTCCATACAGACTGGTGAGGAGTTTTCACTTGAATTTATGTTGGATAGGGTGAATCTTAGGAAGCCTGTAATTACCAATGTTGGTGATCCCAATTCTGGAACAGGTCATAGTAGTCGTGCAGGATGTGAAAGAGGATCAGATATTCCTATGCGAGAAACGGTTGGCAGGGATCCAAAACAGTATGATGGAAAGGATACATTATTACATGGAGGCAGATGCAACTATGGATCAATTCAATCAATGCCAAGAACTTCATATAATCAGGAAAATGGTCGATACGCCTCTTATGGAGGTTCTGATAGCTCATCAATGATGTTGAAAGTCCTTTGCAGCTTTGGTGGTAGAATATTACCAAGACCTGGTGATGGAAAACTTAGATATGTTGGAGGTGAAACACGCATTATCCGAATAAGATCAGACATATCTTGGCAGGACCTTATTCAGAAATCATTGTCAATATATAATCAAACTCATGTAATTAAGTACCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTCTCTGTGTCATCAGATGAAGATTTGCAGAATATGATGGAGGAATGTAATCATCCACAAGATAAAGAAGGATCACAAAAGCTTAGAATTTTTTTATTCTCAATGAGTGATTTGGATGATGCTCAATTTGGTCTCAGTGGTGTGGGTGATGATTCTGAGGTCCAATATGTTGTTGCTGTTAATGGCATGGACTTTGGTTCAAGACACAACTCGGTGCTTCTTGGTGCGAGCTCTTCAGCAAATGATATGCTTGAATTGGACAGGCAAAAGACTGAGAGAGAAGCTGGGAAAGTTCCTGTAGAATCTATAGGTCTCAGCAACATTCCATTGACTGGGAATTATGACTCATCATCAACCAGTCAGTCTTCAAGACCAATTCTTCCAACTTCCTCAAATGCTTATGAAACCTCTCCACTCTACAGAGACCAGATGATGCACCTTGGGGAGGTTTTTGGTCAATATCCTATTCACCATGGCCATAATCCTTCTCAAAATTTTACTCCCATTGAGACTCCTAATGCTATGCCTCCTTATGGGATGATAAATCAACAAGGGATTTTGAATGAAGGTTCTTCTCCTAATGGATTACAAGTACAGAATTCGGAAATACCAGCAATGCTGGTGAAAAAAAGGGGTGATAGCTCAGTTCAACAAGGAAGTAACGCTGCAAAAGTTCTATTCTCGGAAACACCATCCCCTGTTCTGACACAACCAAAAGATGACTTCTTGAAAAATAATGTTAATAAAGCTACAGTTGCAATTAACATACCTGAGGGGAAACTACCCACACTGCCATCAATGAAAAAGGAGCAGCACCAGGAGTATAAAGAGGCATCTTCTGCATCTAGCAGTGCATTTGGTCCTGGTAATGTTGATTCTCAATCCAATGGGATTGATTTAAGTTGCCTTCACCCTCCTCCAATGCCTAAAAGAGTTTACTATTCTTATTCTGAAAGAACTCCTAGGGAGCAAGTAGAATTGCTGAATCGGTCTGCAAAGTCAGATGACACATATGATTCTCAGGTTCCTGTATCAGATTTACTTTCTGACATCAATCCCCAGTATTCAGCCACAGAATCTGGTGACATCTTGCACAATAGAAATCAGTCTAATTTAACAGAGGATTCAAGTACGTCATCAAAACCACTGTATGTGGATGGCAACATCATTTTTAATGGGCTTAACGAACTACATATGCACAAACTGTCGCCTGATACGAGCAGTCAGATAAAGTCAAAACTCTCAGAACCTGTGGATTTGGAGTTGAAGGGGGTATTACCAAACAATGACGGAAGTAGTAAGGTGGCGGTAAATGAGGATCAAGTCATCAGATCTGAGACTGACAATTATTTCGAAGATAACCACAGCAAATCCCTGGTTGATGAAAACAAAAACCTTAAATTAGATTTTCCTGCTTTGGATCAGGTTCCCACTTTTAAGCCCAATGATGACCCAACATCTCATCTTCCTGAGATTAATTGGGGTCATGGCTCGGGGAAAGAATCAAATGATGATTCTATGTTGCAAGAAGTACCTGTTTCTTTGACTGGGAACACAACTGAAGACATTTCTCAAGGTGTTACATCAGATGTTCGTCCCAAACAAACACAGGCTGACATTCTTATTGACATTGATGATCGATTTCCTCGTGAATTGCTTTCTGATATGTATACTAAAGCAATACTTGCGGAAGACCCATCCAGTCTACAACCACTAACTAATATTGGAGTGGGCATAAGCTTAAACATGGAAAACCATGAACCTAAGTCATGGTCATATTTTAAGAAATTAGCACAAGGGCTAGATAACATCTCTCTTATTGACCGGGATCCCCTTGGCTTTTCACCTGAATCTGGAAATGTAGATGATAAAACTCACCTTGTCACGCCGCAAACGCCTGATGAAATATCTGTAGATCAAGCAGATTTGCATCTCAATTTTCATGGAGAAAGTCAGAGGGATTTTAATGGAATAATTGGAACTGAAACCACTTTTGCGCAGTCTAATTATGATCATTCCCAAGTGAAGGAAACTGAAAGTATGCAGTTTGATACTGCTGTGGAGAATTCAGGGGTTCAAGAGTCAGAATTTGAGGATGGGAAGTTTGAAACAAGAAACAGTGGTCTACCGCCACTTGATCCTTCCCTGGGAGGTGTTGATATCAGTACCTTACAGGCCATAAAGAATGAAGATCTTGAAGAGCTGAAGGAATTGGGTTCTGGGACTTTTGGAACTGTGTATCACGGAAAATGGCGGGGAACAGATGTTGCCATCAAAAGAATTAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGGCTGACTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTTCTGGCATTTTATGGTGTAGTCCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCCATGGATGCCGCTTTTGGAATGGAGTATTTGCACTCTAAAAATATCGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACCTGAAAGACCCTGTGAGGCCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAGCGAAATACATTGGTTTCGGGTGGTGTGCGGGGAACCCTACCTTGGATGGCTCCAGAACTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTCGATGTGTTCTCATTTGGCATAGTATTATGGGAGATTCTGACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTAAATAACACGTTAAGGCCAACAATACCAAATTCTTGTGATGCTGAATGGAGGACACTAATGGAGCAATGTTGGGCACCCAACCCTGCAGCCAGGCCTTCCTTCACAGAAATAGCCAGTCGCTTAAGGGTCATGTCCGCTTCTGCTTCTCAAACCAAATCACAGCCTAACAAGCCAACCAAATGA 3690 0.4149 MDPRYDGFQPVSESVMQDHLDGMHTSRGPHAPNKSEVKPVLNYSIQTGEEFSLEFMLDRVNLRKPVITNVGDPNSGTGHSSRAGCERGSDIPMRETVGRDPKQYDGKDTLLHGGRCNYGSIQSMPRTSYNQENGRYASYGGSDSSSMMLKVLCSFGGRILPRPGDGKLRYVGGETRIIRIRSDISWQDLIQKSLSIYNQTHVIKYQLPGEDLDALVSVSSDEDLQNMMEECNHPQDKEGSQKLRIFLFSMSDLDDAQFGLSGVGDDSEVQYVVAVNGMDFGSRHNSVLLGASSSANDMLELDRQKTEREAGKVPVESIGLSNIPLTGNYDSSSTSQSSRPILPTSSNAYETSPLYRDQMMHLGEVFGQYPIHHGHNPSQNFTPIETPNAMPPYGMINQQGILNEGSSPNGLQVQNSEIPAMLVKKRGDSSVQQGSNAAKVLFSETPSPVLTQPKDDFLKNNVNKATVAINIPEGKLPTLPSMKKEQHQEYKEASSASSSAFGPGNVDSQSNGIDLSCLHPPPMPKRVYYSYSERTPREQVELLNRSAKSDDTYDSQVPVSDLLSDINPQYSATESGDILHNRNQSNLTEDSSTSSKPLYVDGNIIFNGLNELHMHKLSPDTSSQIKSKLSEPVDLELKGVLPNNDGSSKVAVNEDQVIRSETDNYFEDNHSKSLVDENKNLKLDFPALDQVPTFKPNDDPTSHLPEINWGHGSGKESNDDSMLQEVPVSLTGNTTEDISQGVTSDVRPKQTQADILIDIDDRFPRELLSDMYTKAILAEDPSSLQPLTNIGVGISLNMENHEPKSWSYFKKLAQGLDNISLIDRDPLGFSPESGNVDDKTHLVTPQTPDEISVDQADLHLNFHGESQRDFNGIIGTETTFAQSNYDHSQVKETESMQFDTAVENSGVQESEFEDGKFETRNSGLPPLDPSLGGVDISTLQAIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVLAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNSCDAEWRTLMEQCWAPNPAARPSFTEIASRLRVMSASASQTKSQPNKPTK 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02673 1229 CDD PB1_UP2 152 248 - -
Accr1g02673 1229 Gene3D Phosphorylase Kinase; domain 1 940 1034 - -
Accr1g02673 1229 MobiDBLite consensus disorder prediction 475 519 - -
Accr1g02673 1229 SUPERFAMILY CAD & PB1 domains 165 255 - -
Accr1g02673 1229 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1035 1227 - -
Accr1g02673 1229 SMART serkin_6 947 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02673 1229 CDD STKc_MAP3K-like 953 1210 - -
Accr1g02673 1229 Gene3D Transferase(Phosphotransferase) domain 1 1035 1229 - -
Accr1g02673 1229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1072 1084 IPR008271 GO:0004672|GO:0006468
Accr1g02673 1229 MobiDBLite consensus disorder prediction 908 930 - -
Accr1g02673 1229 MobiDBLite consensus disorder prediction 68 82 - -
Accr1g02673 1229 PANTHER SERINE-THREONINE PROTEIN KINASE 193 1211 - -
Accr1g02673 1229 ProSiteProfiles Protein kinase domain profile. 947 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02673 1229 Pfam Protein tyrosine and serine/threonine kinase 948 1210 IPR001245 GO:0004672|GO:0006468
Accr1g02673 1229 MobiDBLite consensus disorder prediction 492 515 - -
Accr1g02673 1229 MobiDBLite consensus disorder prediction 323 349 - -
Accr1g02673 1229 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 168 250 - -
Accr1g02673 1229 ProSitePatterns Protein kinases ATP-binding region signature. 953 978 IPR017441 GO:0005524
Accr1g02673 1229 SUPERFAMILY Protein kinase-like (PK-like) 939 1209 IPR011009 -
Accr1g02673 1229 Pfam PB1 domain 165 248 IPR000270 GO:0005515
Accr1g02673 1229 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 940 1034 - -
Accr1g02673 1229 MobiDBLite consensus disorder prediction 573 594 - -
Accr1g02673 1229 MobiDBLite consensus disorder prediction 68 109 - -
Accr1g02673 1229 SMART PB1_new 163 250 IPR000270 GO:0005515
Accr1g02673 1229 Gene3D - 167 250 - -
Accr1g02673 1229 MobiDBLite consensus disorder prediction 88 109 - -
Accr1g02673 1229 PRINTS Tyrosine kinase catalytic domain signature 1066 1084 IPR001245 GO:0004672|GO:0006468
Accr1g02673 1229 PRINTS Tyrosine kinase catalytic domain signature 1181 1203 IPR001245 GO:0004672|GO:0006468
Accr1g02673 1229 PRINTS Tyrosine kinase catalytic domain signature 1137 1159 IPR001245 GO:0004672|GO:0006468
Accr1g02673 1229 PRINTS Tyrosine kinase catalytic domain signature 1029 1042 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02673 Accr-Chr1 63288648 63297624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02673 32 605 MAP Kinase Kinase Kinase AT1G16270 39.185 1.98e-91 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Accr1g02673 PK_Tyr_Ser-Thr 2.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02673 - - gmx:100816522 1579.69