Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02672 ATGGACCCTAGATATGATGGCTTTCAGCCTGTGTCAGAGTCTGTAATGCAGGACCATCTGGATGGCATGCATACTAGTAGGGGGCCGCATGCCCCTAATAAATCTGAAGTTAAACCTGTACTTAATTATTCCATACAGACTGGTCATAGTAGTCGTGCAGGATGTGAAAGAGGATCAGATATTCCTATGCGAGAAACGGTTGGCAGGGATCCAAAACAGTATGATGGAAAGGATACATTATTACATGGAGGCAGATGCAACTATGGATCAATTCAATCAATGCCAAGAACTTCATATAATCAGGAAAATGGTCGATACGCCTCTTATGGAGGTTCTGATAGCTCATCAATGATGTTGAAAGTCCTTTGCAGCTTTGGTGGTAGAATATTACCAAGACCTGGTGATGGAAAACTTAGATATGTTGGAGGTGAAACACGCATTATCCGAATAAGATCAGACATATCTTGGCAGGACCTTATTCAGAAATCATTGTCAATATATAATCAAACTCATGTAATTAAGTACCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTCTCTGTGTCATCAGATGAAGATTTGCAGAATATGATGGAGGAATGTAATCATCCACAAGATAAAGAAGGATCACAAAAGCTTAGAATTTTTTTATTCTCAATGAGTGATTTGGATGATGCTCAATTTGGTCTCAGTGGTGTGGGTGATGATTCTGAGGTCCAATATGTTGTTGCTGTTAATGGCATGGACTTTGGTTCAAGACACAACTCGGTGCTTCTTGGTGCGAGCTCTTCAGCAAATGATATGCTTGAATTGGACAGGCAAAAGACTGAGAGAGAAGCTGGGAAAGTTCCTGTAGAATCTATAGGTCTCAGCAACATTCCATTGACTGGGAATTATGACTCATCATCAACCAGTCAGTCTTCAAGACCAATTCTTCCAACTTCCTCAAATGCTTATGAAACCTCTCCACTCTACAGAGACCAGATGATGCACCTTGGGGAGGTTTTTGGTCAATATCCTATTCACCATGGCCATAATCCTTCTCAAAATTTTACTCCCATTGAGACTCCTAATGCTATGCCTCCTTATGGGATGATAAATCAACAAGGGATTTTGAATGAAGGTTCTTCTCCTAATGGATTACAAGTACAGAATTCGGAAATACCAGCAATGCTGGTGAAAAAAAGGGGTGATAGCTCAGTTCAACAAGGAAGTAACGCTGCAAAAGTTCTATTCTCGGAAACACCATCCCCTGTTCTGACACAACCAAAAGATGACTTCTTGAAAAATAATGTTAATAAAGCTACAGTTGCAATTAACATACCTGAGGGGAAACTACCCACACTGCCATCAATGAAAAAGGAGCAGCACCAGGAGTATAAAGAGGCATCTTCTGCATCTAGCAGTGCATTTGGTCCTGGTAATGTTGATTCTCAATCCAATGGGATTGATTTAAGTTGCCTTCACCCTCCTCCAATGCCTAAAAGAGTTTACTATTCTTATTCTGAAAGAACTCCTAGGGAGCAAGTAGAATTGCTGAATCGGTCTGCAAAGTCAGATGACACATATGATTCTCAGGTTCCTGTATCAGATTTACTTTCTGACATCAATCCCCAGTATTCAGCCACAGAATCTGGTGACATCTTGCACAATAGAAATCAGTCTAATTTAACAGAGGATTCAAGTACGTCATCAAAACCACTGTATGTGGATGGCAACATCATTTTTAATGGGCTTAACGAACTACATATGCACAAACTGTCGCCTGATACGAGCAGTCAGATAAAGTCAAAACTCTCAGAACCTGTGGATTTGGAGTTGAAGGGGGTATTACCAAACAATGACGGAAGTAGTAAGGTGGCGGTAAATGAGGATCAAGTCATCAGATCTGAGACTGACAATTATTTCGAAGATAACCACAGCAAATCCCTGGTTGATGAAAACAAAAACCTTAAATTAGATTTTCCTGCTTTGGATCAGGTTCCCACTTTTAAGCCCAATGATGACCCAACATCTCATCTTCCTGAGATTAATTGGGGTCATGGCTCGGGGAAAGAATCAAATGATGATTCTATGTTGCAAGAAGTACCTGTTTCTTTGACTGGGAACACAACTGAAGACATTTCTCAAGGTGTTACATCAGATGTTCGTCCCAAACAAACACAGGCTGACATTCTTATTGACATTGATGATCGATTTCCTCGTGAATTGCTTTCTGATATGTATACTAAAGCAATACTTGCGGAAGACCCATCCAGTCTACAACCACTAACTAATATTGGAGTGGGCATAAGCTTAAACATGGAAAACCATGAACCTAAGTCATGGTCATATTTTAAGAAATTAGCACAAGGGCTAGATAACATCTCTCTTATTGACCGGGATCCCCTTGGCTTTTCACCTGAATCTGGAAATGTAGATGATAAAACTCACCTTGTCACGCCGCAAACGCCTGATGAAATATCTGTAGATCAAGCAGATTTGCATCTCAATTTTCATGGAGAAAGTCAGAGGGATTTTAATGGAATAATTGGAACTGAAACCACTTTTGCGCAGTCTAATTATGATCATTCCCAAGTGAAGGAAACTGAAAGTATGCAGTTTGATACTGCTGTGGAGAATTCAGGGGTTCAAGAGTCAGAATTTGAGGATGGGAAGTTTGAAACAAGAAACAGTGGTCTACCGCCACTTGATCCTTCCCTGGGAGGTGTTGATATCAGTACCTTACAGGCCATAAAGAATGAAGATCTTGAAGAGCTGAAGGAATTGGGTTCTGGGACTTTTGGAACTGTGTATCACGGAAAATGGCGGGGAACAGATGTTGCCATCAAAAGAATTAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGGCTGACTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTTCTGGCATTTTATGGTGTAGTCCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCCATGGATGCCGCTTTTGGAATGGAGTATTTGCACTCTAAAAATATCGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACCTGAAAGACCCTGTGAGGCCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAGCGAAATACATTGGTTTCGGGTGGTGTGCGGGGAACCCTACCTTGGATGGCTCCAGAACTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTCGATGTGTTCTCATTTGGCATAGTATTATGGGAGATTCTGACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTAAATAACACGTTAAGGCCAACAATACCAAATTCTTGTGATGCTGAATGGAGGACACTAATGGAGCAATGTTGGGCACCCAACCCTGCAGCCAGGCCTTCCTTCACAGAAATAGCCAGTCGCTTAAGGGTCATGTCCGCTTCTGCTTCTCAAACCAAATCACAGCCTAACAAGCCAACCAAATGA 3600 0.4153 MDPRYDGFQPVSESVMQDHLDGMHTSRGPHAPNKSEVKPVLNYSIQTGHSSRAGCERGSDIPMRETVGRDPKQYDGKDTLLHGGRCNYGSIQSMPRTSYNQENGRYASYGGSDSSSMMLKVLCSFGGRILPRPGDGKLRYVGGETRIIRIRSDISWQDLIQKSLSIYNQTHVIKYQLPGEDLDALVSVSSDEDLQNMMEECNHPQDKEGSQKLRIFLFSMSDLDDAQFGLSGVGDDSEVQYVVAVNGMDFGSRHNSVLLGASSSANDMLELDRQKTEREAGKVPVESIGLSNIPLTGNYDSSSTSQSSRPILPTSSNAYETSPLYRDQMMHLGEVFGQYPIHHGHNPSQNFTPIETPNAMPPYGMINQQGILNEGSSPNGLQVQNSEIPAMLVKKRGDSSVQQGSNAAKVLFSETPSPVLTQPKDDFLKNNVNKATVAINIPEGKLPTLPSMKKEQHQEYKEASSASSSAFGPGNVDSQSNGIDLSCLHPPPMPKRVYYSYSERTPREQVELLNRSAKSDDTYDSQVPVSDLLSDINPQYSATESGDILHNRNQSNLTEDSSTSSKPLYVDGNIIFNGLNELHMHKLSPDTSSQIKSKLSEPVDLELKGVLPNNDGSSKVAVNEDQVIRSETDNYFEDNHSKSLVDENKNLKLDFPALDQVPTFKPNDDPTSHLPEINWGHGSGKESNDDSMLQEVPVSLTGNTTEDISQGVTSDVRPKQTQADILIDIDDRFPRELLSDMYTKAILAEDPSSLQPLTNIGVGISLNMENHEPKSWSYFKKLAQGLDNISLIDRDPLGFSPESGNVDDKTHLVTPQTPDEISVDQADLHLNFHGESQRDFNGIIGTETTFAQSNYDHSQVKETESMQFDTAVENSGVQESEFEDGKFETRNSGLPPLDPSLGGVDISTLQAIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVLAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNSCDAEWRTLMEQCWAPNPAARPSFTEIASRLRVMSASASQTKSQPNKPTK 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02672 1199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1042 1054 IPR008271 GO:0004672|GO:0006468
Accr1g02672 1199 SUPERFAMILY Protein kinase-like (PK-like) 909 1179 IPR011009 -
Accr1g02672 1199 MobiDBLite consensus disorder prediction 293 319 - -
Accr1g02672 1199 MobiDBLite consensus disorder prediction 543 564 - -
Accr1g02672 1199 SUPERFAMILY CAD & PB1 domains 135 225 - -
Accr1g02672 1199 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 910 1004 - -
Accr1g02672 1199 CDD PB1_UP2 122 218 - -
Accr1g02672 1199 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 138 220 - -
Accr1g02672 1199 MobiDBLite consensus disorder prediction 58 79 - -
Accr1g02672 1199 MobiDBLite consensus disorder prediction 445 489 - -
Accr1g02672 1199 Pfam Protein tyrosine and serine/threonine kinase 918 1180 IPR001245 GO:0004672|GO:0006468
Accr1g02672 1199 Gene3D - 137 220 - -
Accr1g02672 1199 PANTHER SERINE-THREONINE PROTEIN KINASE 166 1181 - -
Accr1g02672 1199 MobiDBLite consensus disorder prediction 878 900 - -
Accr1g02672 1199 Pfam PB1 domain 135 218 IPR000270 GO:0005515
Accr1g02672 1199 SMART serkin_6 917 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02672 1199 SMART PB1_new 133 220 IPR000270 GO:0005515
Accr1g02672 1199 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1005 1197 - -
Accr1g02672 1199 MobiDBLite consensus disorder prediction 49 79 - -
Accr1g02672 1199 Gene3D Phosphorylase Kinase; domain 1 910 1004 - -
Accr1g02672 1199 MobiDBLite consensus disorder prediction 462 485 - -
Accr1g02672 1199 ProSitePatterns Protein kinases ATP-binding region signature. 923 948 IPR017441 GO:0005524
Accr1g02672 1199 ProSiteProfiles Protein kinase domain profile. 917 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02672 1199 Gene3D Transferase(Phosphotransferase) domain 1 1005 1199 - -
Accr1g02672 1199 PRINTS Tyrosine kinase catalytic domain signature 1107 1129 IPR001245 GO:0004672|GO:0006468
Accr1g02672 1199 PRINTS Tyrosine kinase catalytic domain signature 999 1012 IPR001245 GO:0004672|GO:0006468
Accr1g02672 1199 PRINTS Tyrosine kinase catalytic domain signature 1036 1054 IPR001245 GO:0004672|GO:0006468
Accr1g02672 1199 PRINTS Tyrosine kinase catalytic domain signature 1151 1173 IPR001245 GO:0004672|GO:0006468
Accr1g02672 1199 CDD STKc_MAP3K-like 923 1180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02672 Accr-Chr1 63288648 63297624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02672 32 575 MAP Kinase Kinase Kinase AT1G16270 36.677 1.24e-78 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Accr1g02672 PK_Tyr_Ser-Thr 2.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02672 - - gmx:100816522 1527.69