Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02671 ATGGAACCTAGAAATGAGGAACTCCATTCTGCACCACAGTCCACCGTGCAGGACCGTCTGGAAGGTATGCGTATCAACATGAGGCCAGCTGACCGTAACATGTCAGATAAAAAACCTGTACTTAATTACTCCATTCAGACTGGTGAGGAATTTGCCCTTGAATTTATGCGAGATAGAGTGAATCTCAGGCAGCCTGTCTTTCCAAATATCATGGGTGATCCCAATTATGCAACGGGTTATATGGAATTTAAGGGTATTTTAGGCATTAATCATTCAGGATCTGAAACTGGATCAGATATTTCTATGATCCCAAAAGTCGAAAAAGGTCCCAAAGAATTTGATAGAAGAAGTTCTTCTATGCAACGGGACAGAAGCAACTATGGATCAATTCGAACGATCCCTAGAAATTCATCCAATCAAGAAAATAACCGGGTCCTTCATGGTCTTGCTTCTTCTGGACCTTCTACTGGCTCATCAATGAAGATGAAGGTTCTTTGTAGTTTTGGTGGTAAAATATTGCCACGCCCCAGTGATGGAAAGCTTAGATACGTTGGAGGTGAAACGCGTATTATTAGTATCAGAAGGGACATAACTTGGCAGGAGCTTATGCAGAAAGCCTTATCACTCTTTAATGAAACTCATGCTATTAAGTATCAGCTCCCTGGAGAAGATCTTGATGCCTTGGTTTCTGTATCTAGTGATGAGGATCTGCGAAATATGATGGAGGAATGCAATGATCTAAACAGAGCAGGATCACAAAAACTTAGGATGTTTCTGTTTTCCATGGTCGATATGGATGATCCTAGTGTTGATGGTGATACGGAAGTCCAGTATGTAGTGGCTGTTAATGGCATGGACTTGGGATCAAGGAACCATTCGTTCGTTCATGCTGCAAACGCTTCTGCTGATAATTTACATGAACTAGATGGACAGAATATTGAGAGGGAGGCCAGTAGAACTCAGATAGAATCAACTGGAGCTATTAGTTCTTCTTGGACTGCCAATGCTAACTCATCATTGGGAATTCAGTCTTCACAACCAGTGATTCCGACTGCCTCAACCAGTGCTTATGAAAGCAATATGTTGTTTCATAGTAACCATCATGGGGAATCCAGTCAATATCCAGTGCACTATGGTGTTGATTCTTCTAACAACTCGGCTTTTAGACAGATTCCAGTTTCTCTGCCTACACATGTTCCTAACAATCAAGGAATTGTCAATGATGGACATCCACCTGAAGTGTTGCAAGCACAAAATTCAGAAATGCCAGCAATTCAGGTAAAGAAAAGGGGTGATAGTTCCATTAAGCATGAAGGTGACTCTGGAAAAGGCTTATCCTCAGAAACACTGTATCCTGTCCCTCCACAACCATTTGATGGAAATTTACCGGGTAATTTTTCTGAAGCATCAGTTACAAATGCTGTACAAGGGGCACACCTACATAAATTGCCTTCAAAAAGCAAGGGCAAGCACCAACAGTATGAAGAGGCCTCTTCATTCGCTAATGCAGTGAATTCCACTCAGATTCCAAAGTCTGTTGAAGATGACCTCTATTCTACCTCTACTACTAATGCTTTCAATCCTTCTTATGTTGATGCTGGGTCGAATGTTATTGATTTGAGTTGCCTTGAGCCACCTGCACTTCCCAACAGAGTCTATTATTCAGAGAGAATCCCTAGAGAGCAGGCAGATTTGCTGAACCGATCCACAAAATCAGATGATGCATATGGCTCTCAAGCTCTCATGTCTGATTTGTTCTCTGACTTAGACCAACAGAATTCAACTGCTGAATCAAGTGATAAGTTCCAGGTTGGACATCTGTCAAATCTGACTGCAGTGTCAAGCATGACAGCAATACAGTCGAATACAAATGGCCATGCCATTGACAATGGGCTTGCCCGGATACAAAATCATAAACAGTTGCCAGATGTAAACAACACAGATAAAAAAATTGCTGCAAATGAGGATTGGGTCCTTAGATCTGAAAGTGACACCAACTTATCCAAAGATAACCATAACAATCGCCTAGTTGATGAAACCAAAAGCACTGAACATCCTGTTTTTCACAAGGTTCCATCTGATCGTAAGTTGGGTGATGCTTCTAACAAAGAATTTAGTAACGATCCTAAGGTTCAAGCACAGCCCTTTTTTTTAACTGGGAACATGAGCCAAGATGTTTCTCAAGGTTTACCCACTGATGCTGTTTCCACACCTGCTCAGGGTGACATTATGATTGATATTGAAGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTTTCCAAGGCAATACACTCTGAAGATTCCTCACATATTAGTCCATTGCCAACAGATGGAACAGGCTTGAGCTTAAATGTGGAAAATCATGAGCCAAAAAGTTGGTCATATTTTCAGAAGTTGGCAAATGAAGGATCTGATAATGTGTCTCTAATTGATCAAGATCATCTAGGTTTTTCGTCTGCATTAAGAAAAGTAAAAGAAGGAGATAGTAGATCTCAGCAAGTTGCACCCCCGCCAGCTGATGGAGTTTCAGTAGGCCATGATTTTGGTAAAGAAAATCAGAAACATTTGCCTGTGACAACTAGAACAGAGGCCACTGTCCTGCAGCCAAACTTTGATCAAACCCAAGTTACTGAGACGGAAATCAAGAATGTGTATCCAGTAGAGGGAAACACAAAAGTAAAAGACTCTGAATATGAGGATGGCAAGAATGAAGCAGGGAATATGGGTCATCCGCATGATCCTTCTTTGGAGGACATTGACATCAGTACTTTGCAGCTCATAAATAATGAAGATCTTGAAGAGCTGAAAGAATTGGGTTCAGGAACCTTCGGGACTGTATACCATGGAAAATGGAGGGGAACAGATGTTGCCATTAAGAGAATAAAGAAAAGCTGCTTCACTGGTAGATCTTCAGAACAAGAAAGACTGGCCTTAGAGTTTTGGCGGGAAGCTGACATACTTTCCAAGCTTCATCACCCAAATGTGGTGGCATTCTATGGTGTGGTGCAGGACGGGCCTGGAGGAACACTAGCTACTGTTACAGAATTCATGGTTGATGGTTCTCTAAGGCATGTTTTGCTTCGTAAGGATAGGTACCTAGATCGCCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAATATTGTACATTTTGATTTGAAATGTGACAATTTGCTTGTCAACTTAAAGGATCCTTTACGACCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAACGAAATACCCTGGTTTCCGGTGGTGTGCGGGGAACCCTACCTTGGATGGCACCTGAGCTTTTGAATGGCAGCAGCAATAAAGTCTCAGAGAAGGTTGATGTGTTCTCGTTTGGCATTGTATTATGGGAAATTCTTACAGGTGAAGAACCATATGCTAATATGCACTATGGTGCAATTATAGGAGGCATTGTAAATAACACATTAAGGCCAACAATCCCCAGTTATTGTGATAATGAGTGGCGGCAACTAATGGAGCAGTGTTGGGCACCTAACCCTTCAGTGAGGCCATCATTCACAGAAATTGCTCGTCGCTTGAGGGTGATGTCAGCAGCTGCTAGTCAGACCAAAGGGCAAGGCTACAAGGCTTCTAAGTGA 3648 0.4189 MEPRNEELHSAPQSTVQDRLEGMRINMRPADRNMSDKKPVLNYSIQTGEEFALEFMRDRVNLRQPVFPNIMGDPNYATGYMEFKGILGINHSGSETGSDISMIPKVEKGPKEFDRRSSSMQRDRSNYGSIRTIPRNSSNQENNRVLHGLASSGPSTGSSMKMKVLCSFGGKILPRPSDGKLRYVGGETRIISIRRDITWQELMQKALSLFNETHAIKYQLPGEDLDALVSVSSDEDLRNMMEECNDLNRAGSQKLRMFLFSMVDMDDPSVDGDTEVQYVVAVNGMDLGSRNHSFVHAANASADNLHELDGQNIEREASRTQIESTGAISSSWTANANSSLGIQSSQPVIPTASTSAYESNMLFHSNHHGESSQYPVHYGVDSSNNSAFRQIPVSLPTHVPNNQGIVNDGHPPEVLQAQNSEMPAIQVKKRGDSSIKHEGDSGKGLSSETLYPVPPQPFDGNLPGNFSEASVTNAVQGAHLHKLPSKSKGKHQQYEEASSFANAVNSTQIPKSVEDDLYSTSTTNAFNPSYVDAGSNVIDLSCLEPPALPNRVYYSERIPREQADLLNRSTKSDDAYGSQALMSDLFSDLDQQNSTAESSDKFQVGHLSNLTAVSSMTAIQSNTNGHAIDNGLARIQNHKQLPDVNNTDKKIAANEDWVLRSESDTNLSKDNHNNRLVDETKSTEHPVFHKVPSDRKLGDASNKEFSNDPKVQAQPFFLTGNMSQDVSQGLPTDAVSTPAQGDIMIDIEDRFPRDFLYDMFSKAIHSEDSSHISPLPTDGTGLSLNVENHEPKSWSYFQKLANEGSDNVSLIDQDHLGFSSALRKVKEGDSRSQQVAPPPADGVSVGHDFGKENQKHLPVTTRTEATVLQPNFDQTQVTETEIKNVYPVEGNTKVKDSEYEDGKNEAGNMGHPHDPSLEDIDISTLQLINNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLALEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDNEWRQLMEQCWAPNPSVRPSFTEIARRLRVMSAAASQTKGQGYKASK 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02671 1215 Gene3D Transferase(Phosphotransferase) domain 1 1021 1214 - -
Accr1g02671 1215 ProSitePatterns Protein kinases ATP-binding region signature. 939 964 IPR017441 GO:0005524
Accr1g02671 1215 SMART serkin_6 933 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02671 1215 MobiDBLite consensus disorder prediction 122 142 - -
Accr1g02671 1215 Pfam PB1 domain 178 260 IPR000270 GO:0005515
Accr1g02671 1215 Gene3D - 180 262 - -
Accr1g02671 1215 MobiDBLite consensus disorder prediction 109 142 - -
Accr1g02671 1215 Gene3D Phosphorylase Kinase; domain 1 926 1020 - -
Accr1g02671 1215 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 926 1020 - -
Accr1g02671 1215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1058 1070 IPR008271 GO:0004672|GO:0006468
Accr1g02671 1215 MobiDBLite consensus disorder prediction 824 845 - -
Accr1g02671 1215 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1021 1213 - -
Accr1g02671 1215 Pfam Protein tyrosine and serine/threonine kinase 934 1196 IPR001245 GO:0004672|GO:0006468
Accr1g02671 1215 MobiDBLite consensus disorder prediction 427 448 - -
Accr1g02671 1215 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 181 262 - -
Accr1g02671 1215 PANTHER SERINE-THREONINE PROTEIN KINASE 206 1197 - -
Accr1g02671 1215 ProSiteProfiles Protein kinase domain profile. 933 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02671 1215 CDD STKc_MAP3K-like 939 1196 - -
Accr1g02671 1215 SUPERFAMILY Protein kinase-like (PK-like) 924 1195 IPR011009 -
Accr1g02671 1215 PRINTS Tyrosine kinase catalytic domain signature 1015 1028 IPR001245 GO:0004672|GO:0006468
Accr1g02671 1215 PRINTS Tyrosine kinase catalytic domain signature 1167 1189 IPR001245 GO:0004672|GO:0006468
Accr1g02671 1215 PRINTS Tyrosine kinase catalytic domain signature 1052 1070 IPR001245 GO:0004672|GO:0006468
Accr1g02671 1215 PRINTS Tyrosine kinase catalytic domain signature 1123 1145 IPR001245 GO:0004672|GO:0006468
Accr1g02671 1215 SMART PB1_new 176 262 IPR000270 GO:0005515
Accr1g02671 1215 SUPERFAMILY CAD & PB1 domains 177 261 - -
Accr1g02671 1215 CDD PB1_UP2 165 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02671 Accr-Chr1 63278746 63284311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02671 10 1215 MAP Kinase Kinase Kinase AT1G16270 47.231 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Accr1g02671 PK_Tyr_Ser-Thr 1.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02671 - - gmx:100799118 1589.32