Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02669 ATGGATCAATCGGAGCAGGCACAACAGCAACAGCAGCAGCAAAAGCATGTGGTCGGAGTTGCCTCTGGCCCTGGCCAGATGGCTTATTCTACTCACTACCAGACTGCCCCCATGGTAGCTTCTGGAACACCGGCTGTAGCTGGAACTTCCCCAACACAGCCTCCGGCCAACTTCTCAAACCCCCCTCATCAAATTGCATTCCAGCAGGCACATCATTTCCACCATCAACAGCAGCAGCAGCAGCAACAACTGCAGATATTTTGGGCGAACCAAATGCAAGAAATCGAGCAAACAACTGACTTCAAGAATCATAGTCTTCCACTTGCTAGAATTAAAAAAATCATGAAAGCTGATGAGGATGTCCGGATGATTTCAGCGGAGGCCCCGGTCATATTTGCCAAAGCATGTGAAATGTTTATCCTGGAGTTGACTCTGAGATCGTGGATCCACACGGAAGAAAACAAGAGGAGAACACTACAGAAGAATGATATAGCTGCTGCTATTTCGAGGACTGACGTTTTCGATTTCTTGGTTGACATTATCCCAAGAGATGAATTGAAAGAAGAGGGACTTGGAGTAACTAAGGCTACAATTCCAGTTGTGGGTTCCCCAGCTGATATGCCCTATTATTATGTTCCACCTCAGCATCCTGTGGGACCTACTGGGATGATCATGGGAAAACCAGTTGACCAGGCAGCACTATATGCTACCCAACAGCCTCGACCTCCTCATATGGCGTTCATGCCGTGGCCGCAAACACAACCTCCACAACAGCCGCCACCTGATCAGCAACAACCGGACACTTGA 807 0.4857 MDQSEQAQQQQQQQKHVVGVASGPGQMAYSTHYQTAPMVASGTPAVAGTSPTQPPANFSNPPHQIAFQQAHHFHHQQQQQQQQLQIFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKATIPVVGSPADMPYYYVPPQHPVGPTGMIMGKPVDQAALYATQQPRPPHMAFMPWPQTQPPQQPPPDQQQPDT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02669 268 Gene3D Histone, subunit A 66 183 IPR009072 GO:0046982
Accr1g02669 268 MobiDBLite consensus disorder prediction 241 268 - -
Accr1g02669 268 Pfam Core histone H2A/H2B/H3/H4 62 168 IPR007125 GO:0003677
Accr1g02669 268 FunFam Nuclear transcription factor Y subunit gamma 71 183 - -
Accr1g02669 268 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 52 215 - -
Accr1g02669 268 MobiDBLite consensus disorder prediction 244 268 - -
Accr1g02669 268 SUPERFAMILY Histone-fold 65 177 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02669 Accr-Chr1 63267736 63268542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02669 84 212 CCAAT-HAP5 Transcription Factor Family AT1G56170 92.308 1.50e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr1g02669 Histone 1.8e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02669 K08066 - jre:109011255 388.652