Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02611 ATGGCAGCCACTACTACTACAACCGCCGCGACGCCGCGCCAATTATCCCAGAAGGAGGCTGACATTCAGATGATGTTGGCCGCTGAGGTTCACCTCGGGACGAAAAATTGTAACTTTCAAATGGAGCGGTATGTCTTCAAGCGCCGCAACGATGGTATTTACATAATCAACCTTGGGAAGACTTGGGAAAAGCTCCAGCTTGCTGCTAGGGTTATTGTTGCCATTGAGAACTCTAAGGACATTATTGTTCAGTCTGCTAGGCCTTATGGTCAGAGAGCAGTTCTCAAGTTTGCTCAATACACAGGTGCTCATGCTCTTGCTGGAAGGCATACTCCTGGAACATTCACTAACCAGCTCCAGACATCCTTTAGTGAGCCTCGGCTTCTCATTCTGACTGATCCAAGAACAGATCATCAGCCCATTAAGGAAGCTGCACTTGGAAATATACCGACTATTGCCTTCTGTGACACTGACTCTCCCATGAGATATGTTGACATCGGCATTCCTGCCAATAATAAGGGAAAGCACAGCATAGGTTGCCTCTTTTGGCTATTGGCAAGGATGGTTCTGCAGATGAGGGGAACTATTCGTCCAGGGCTTAAGTGGGAAGTGATGGTGGACTTGTTCTTCTATAGAGAACCTGAGGAGACCAAGCAACAAGAGGAAGATGAAGCACCTGTTGCTCCAGACTACGCTATTACAGACTTCAATGCTCCTGGCATTGCTGCTGATGACCAGTGGCCTACTGCCATTGATCAGACCTGGACGACTGAGGCAGCCCCACAGCTGCCTATTGCTGCAGCTCCTGCTGTCAATTGGGCTGCAGATACTGCTGGAGAATGGGTGGAGACTGCGCCACCTACCCAAGCTCCAGTCCAACAAATTCCTGCCCCCGGACTTGCGGATGTGACTGCCACGGGCTGGGAGTAA 930 0.5011 MAATTTTTAATPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENSKDIIVQSARPYGQRAVLKFAQYTGAHALAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWEVMVDLFFYREPEETKQQEEDEAPVAPDYAITDFNAPGIAADDQWPTAIDQTWTTEAAPQLPIAAAPAVNWAADTAGEWVETAPPTQAPVQQIPAPGLADVTATGWE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02611 309 SUPERFAMILY Ribosomal protein S2 17 207 IPR023591 -
Accr1g02611 309 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 Gene3D - 21 226 - -
Accr1g02611 309 Hamap 40S ribosomal protein SA [rps-0]. 9 276 IPR027498 GO:0003735|GO:0006412|GO:0015935
Accr1g02611 309 PANTHER 40S RIBOSOMAL PROTEIN SA 11 291 IPR005707 GO:0003735|GO:0006412|GO:0015935
Accr1g02611 309 Pfam Ribosomal protein S2 25 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 Pfam Ribosomal protein S2 124 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 NCBIfam 30S ribosomal protein S2 17 213 IPR005707 GO:0003735|GO:0006412|GO:0015935
Accr1g02611 309 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr1g02611 309 FunFam 40S ribosomal protein SA 21 227 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02611 1 272 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 77.007 1.17e-153 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02611 K02998 - gmx:100805318 494.967