Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02582 ATGGCTTTTATCCTTAACCCCAGCTTCTGCCGCCGCCTGTTATTAATTTCCCTGTACTTTCTTTTTTCTGCTATTAATTTACTTTCCAGCTCTGTTTCCATTTCTGGAACTCCCAACCACACATTAATCTGTGCCTTGCAGAGTAATAACCGGCCCCAAGGACAAAAAGCATTCCTAAACTGTACCAGTTTTCCCTCTGGGATTCAAATTCAAGTGAACCCCAACATTTCCTTCTCTGAGATTGCTGGAGGAAATGGGTTTATCTGTGCATTGAGGCCACCAATGGGTTCACCTTCTTCTTCTTCCATGTTTTGTTGGAGATTCTCTACCAATGCGACCAATGTTGTCCCCAAGAGAATATACCGTGGGCCTATGATTCAAAATTTGGAAGCTGGAAACTCTCAAGTTTGTGGCCTTTCAAACCCCAACAATGAGCTTCACTGCTGGCAATGGCCTGGGTTCAACTCAAGTCAAAGAAGCTTCTCAAGCATATCTGCGGGAGAGAATTTCGTTTGTGGGTTGTTATTGGAAACATCTGGGAATATTGATTGCCTTGGAAATAATACCACAGTTATTAGACATGAACCTACAGGGAAGTACTCTGTGATTGCTGCAGGGACGAGACATGCTTGTGCTATCTTCTCCATTAATGGAAGCTTGTATTGTTGGGGTGACGTACCAGGAGCCGTAACGACGCCTCCTCCAGGGACATTCGTCTCATTGGCTTTGGGAGATAATCGAAGTTGTGCTCTGAGGGCTGTGAATCATACAATTGTTTGTTGGGGGGATGGTTTTAACGTGCCAGAGAGCTTGAGAAACCAATCTTTTGAAGCAATCACAGCTAAAGGAAGTGTTTTCTGTGGCGTTATGTCTGGTGATTTTTCTTTGCATTGTTGGGGAAATGATAATTTGGGGATGAACGGGGCTGCTCATAAGGTGTTTGATAAGGTCCTACCTGGTCCTTGTAGAACTCAATGTCTATGTGGACCATTGCCAGGTTCTGCACCGTTTTGTGAACGGGTTCAGGGATCTATTTGCCGTTCTTGTGATAGCCAACCACTACCTGAATCCCAACCACCCCCTCCGCCGTCACCTATAAGTGCTCCTTCACAATCAAGGCAAAATGATTGGAACAGCAAAATGGTGGCATTTCTAGTGGTTGGCTGTGTTGGTTCACTTTCTTTGATGCTAGTCCTGGCATTCTTTCTCTATAAGTATTGCAAAGGCCGAGGATGCAAGCGTGTCCATGACTCTGGCCGGTTGGATGAGCCGGAAGATCAACCGGCAAACCAGCGAACTTTAGAGAAGAGATTGAGTCATATGATCAGCATGGGAAATGGAGGCCACTTGGAGGAATTTTGTTGGGAAATACTATTGGAAGCAACCAACAATTTCTCAGAAGATAAAAAAATAGGAACAGGCAGTTTTGGTTCAGTGTACCGTGCCACACTCAAAGATGGCAGAGAAGTGGCCGTAAAAAGAGCTGAGATCTCAACCACCTCCCCATCAAACCAAATCCCAGGAGGCTCCAAGCGTCAAGAAGACAAAGACAACGCGTTTGTGAATGAACTCGAATCCTTATCCAGACTCAACCATAAGAACCTGGTGAGATTACTGGGTTTCTTCGAGGACAAGAATGAGAGAATTCTAGTCTACGAGTTTATGATCAATGGTAGCCTAACAGACCACCTTCACAAGTTCCAAACTTCAACTCCTAATTGTCCTCTCATGTCATGGTCAGGACGCATCCAAATAGCTCTAGATGCAGCCAGAGGCATAGAGTACCTACACGAGTATGCAATTCCACCAATCATTCATCGTGATATCAAATCAGCAAACATACTATTAGACGCCAAATGGGTCGCCAAAGTATCAGATTTTGGACTCTCCCTAATGGGTCCTGAAGATGAAAAGTCTCATCTTTCTCTTCTGGCTGCAGGCACTGTAGGGTACATGGATCCAGAGTACTACAGGCTGCAAGTCTTGACCACAAAGAGTGACGTGTACAGTTTTGGTGTTGTTTTGCTCGAACTGCTTTGTGGGTATAAAGCTATACACCGGAACGAGAATGGGACGCCGAGGAATGTGGTGGATTTTGTGGTGCCATACATTGTGCAGGATGAGATTCATAGGGTTTTGGATCGGAGGTTGCCGCCTCCCACCCCGTATGAGATAGAGGCGGTGGCATTTGTGGGATATTTGGCGGCAGATTGTGTGTGTTTAGAAGGACGTGATCGTCCTACAATGACTAACGTTGTAGATAGGCTGGAAAGAGCGTTGGATGCTTGTTTAGCTCAACCAAAACCAACGCTTACTAGCTTTAATTCTGAATCTGATTCTGATTAA 2346 0.451 MAFILNPSFCRRLLLISLYFLFSAINLLSSSVSISGTPNHTLICALQSNNRPQGQKAFLNCTSFPSGIQIQVNPNISFSEIAGGNGFICALRPPMGSPSSSSMFCWRFSTNATNVVPKRIYRGPMIQNLEAGNSQVCGLSNPNNELHCWQWPGFNSSQRSFSSISAGENFVCGLLLETSGNIDCLGNNTTVIRHEPTGKYSVIAAGTRHACAIFSINGSLYCWGDVPGAVTTPPPGTFVSLALGDNRSCALRAVNHTIVCWGDGFNVPESLRNQSFEAITAKGSVFCGVMSGDFSLHCWGNDNLGMNGAAHKVFDKVLPGPCRTQCLCGPLPGSAPFCERVQGSICRSCDSQPLPESQPPPPPSPISAPSQSRQNDWNSKMVAFLVVGCVGSLSLMLVLAFFLYKYCKGRGCKRVHDSGRLDEPEDQPANQRTLEKRLSHMISMGNGGHLEEFCWEILLEATNNFSEDKKIGTGSFGSVYRATLKDGREVAVKRAEISTTSPSNQIPGGSKRQEDKDNAFVNELESLSRLNHKNLVRLLGFFEDKNERILVYEFMINGSLTDHLHKFQTSTPNCPLMSWSGRIQIALDAARGIEYLHEYAIPPIIHRDIKSANILLDAKWVAKVSDFGLSLMGPEDEKSHLSLLAAGTVGYMDPEYYRLQVLTTKSDVYSFGVVLLELLCGYKAIHRNENGTPRNVVDFVVPYIVQDEIHRVLDRRLPPPTPYEIEAVAFVGYLAADCVCLEGRDRPTMTNVVDRLERALDACLAQPKPTLTSFNSESDSD 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02582 781 SUPERFAMILY RCC1/BLIP-II 101 310 IPR009091 -
Accr1g02582 781 Gene3D - 25 193 IPR009091 -
Accr1g02582 781 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 197 770 IPR044815 GO:0004674
Accr1g02582 781 CDD STKc_IRAK 471 758 - -
Accr1g02582 781 FunFam Serine/threonine-protein kinase-like protein CCR4 555 775 - -
Accr1g02582 781 Pfam Protein kinase domain 465 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02582 781 SMART serkin_6 465 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02582 781 Gene3D - 194 325 IPR009091 -
Accr1g02582 781 SUPERFAMILY Protein kinase-like (PK-like) 443 757 IPR011009 -
Accr1g02582 781 MobiDBLite consensus disorder prediction 354 368 - -
Accr1g02582 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Accr1g02582 781 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Accr1g02582 781 Gene3D Transferase(Phosphotransferase) domain 1 555 769 - -
Accr1g02582 781 MobiDBLite consensus disorder prediction 352 374 - -
Accr1g02582 781 ProSiteProfiles Protein kinase domain profile. 465 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02582 781 MobiDBLite consensus disorder prediction 494 515 - -
Accr1g02582 781 Gene3D Phosphorylase Kinase; domain 1 427 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02582 Accr-Chr1 61981098 61983443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02582 30 773 Receptor kinase-like Gene Family AT5G47850 50.000 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Accr1g02582 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02582 - - qsa:O6P43_029962 934.48