Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02569 ATGTCCTCCTCCACCGCCACCGCCACCGCCACCGACACTTCCACCGTGCCAGAGACGGCGGAAGCAGAAATGAAGACTTACTGGTGTCACGAATGTGACATGAGTGTTGCTCTGTCTTCCCCTTCTTCAACTTCCTCGTCAACTCTTCTCTGCCCCCATTGCCACACCCACTTCCTCGAACTCATGGACTCTCCTTTCTTCCCTCAATCAGATTCTCATTCATTTCCCGCTTCGCTTTCCCTCTTCGACACCCCCTACCTCCACCACCTAATCCAGAACCACGTCCTTCCCTCGGACGACGATGACAGTGAACTTGAGTACGACGACGTTTTCGAAGACCCGTTATCTCTGCTCTCCGCACTACCAAATAGCACCTCCAAATCTTGCTCTGATTCTGTACCCACGATAATAGTTACCTCTTTGTTCCTATCGCAGCTTGACCCTGGAGGCGTTCTTTGTGCGGTTTGTAAGGACCCAATTGGGATTGATGCGCAGGCTAAGCAGCTTCCGTGTAAGCATTTGTACCACTCCGATTGCATTACGCCGTGGCTGGAGCACCACAATTCTTGCCCGCTTTGTCGCTTTCAGCTGGTCGGTGAAAAAGAGGAGGGGGTTTCTCAGGCGAGGAGGATCAGAAGGCAGTTGAGGACAGCCATGATGAGGCTATCTGAATTGATGGAAGAGGAGGATGATTTCTATGGTTTGAGGACCACTCTGAGTCACATTGCTAGTAGACACCGCGTTCTTTCTTCTGCTGTTTCAGGTCAAAGGAATGATGAGAACCCTTCTGATTCCCTGGCTTCCCCTCCGATGACGGAAGCAGATTCTATATCTGCTGGCGTCAATGGTAATTCGGAGTCTCTTTCGAGCTGA 873 0.5132 MSSSTATATATDTSTVPETAEAEMKTYWCHECDMSVALSSPSSTSSSTLLCPHCHTHFLELMDSPFFPQSDSHSFPASLSLFDTPYLHHLIQNHVLPSDDDDSELEYDDVFEDPLSLLSALPNSTSKSCSDSVPTIIVTSLFLSQLDPGGVLCAVCKDPIGIDAQAKQLPCKHLYHSDCITPWLEHHNSCPLCRFQLVGEKEEGVSQARRIRRQLRTAMMRLSELMEEEDDFYGLRTTLSHIASRHRVLSSAVSGQRNDENPSDSLASPPMTEADSISAGVNGNSESLSS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02569 290 Pfam Ring finger domain 153 194 IPR001841 -
Accr1g02569 290 MobiDBLite consensus disorder prediction 251 290 - -
Accr1g02569 290 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 75 197 - -
Accr1g02569 290 SUPERFAMILY RING/U-box 144 197 - -
Accr1g02569 290 Coils Coil 208 228 - -
Accr1g02569 290 SMART ring_2 153 193 IPR001841 -
Accr1g02569 290 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 209 IPR013083 -
Accr1g02569 290 Pfam zinc-ribbon 26 62 IPR039525 GO:0061630
Accr1g02569 290 ProSiteProfiles Zinc finger RING-type profile. 153 194 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02569 Accr-Chr1 61811136 61812008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02569 20 254 C3H Transcription Factor Family AT3G60080 35.125 5.40e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02569 K11982 - pcin:129316714 351.288