Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02568 ATGTCCTCCTCCACCGCCACCGCCACCGCCACCGACACTTCCACCGTGCCAGAGACGGCGGAAGCAGAAATGAAGACTTACTGGTGTCACGAATGTGACATGAGTGTTGCTCTGTCTTCCCCTTCTTCAACTTCCTCGTCAACTCTTCTCTGCCCCCATTGCCACACCCACTTCCTCGAACTCATGGACTCTCCTTTCTTCCCTCAATCAGATTCTCATTCATTTCCCGCTTCGCTTTCCCTCTTCGACACCCCCTACCTCCACCACCTAATCCAGAACCACGTCCTTCCCTCGGACGACGATGACAGTGAACTTGAGTACGACGACGTTTTCGAAGACCCGTTATCTCTGCTCTCCGCACTACCAAATAGCACCTCCAAATCTTGCTCTGATTCTGTACCCACGATAATAGTTACCTCTTTGTTCCTATCGCAGCTTGACCCTGGAGGCGTTCTTTGTGCGGTTTGTAAGGACCCAATTGGGATTGATGCGCAGGCTAAGCAGCTTCCGTGTAAGCATTTGTACCACTCCGATTGCATTACGCCGTGGCTGGAGCACCACAATTCTTGCCCGCTTTGTCGCTTTCAGCTGGTCGGTGAAAAAGAGGAGGGGGTTTCTCAGGCGAGGAGGATCAGAAGGCAGTTGAGGACAGCCATGATGAGGCTATCTGAATTGATGGAAGAGGAGGATGATTTCTATGGTTTGAGGACCACTCTGAGTCACATTGCTAGTAGACACCGCGTTCTTTCTTCTGCTGTTTCAGGTCAAAGGAATGATGAGAACCCTTCTGATTCCCTGGCTTCCCCTCCGATGACGGAAGCAGATTCTATATCTGCTGGCGTCAATGGTATAGGGTTTTTATTTGCCAAAGAAATCTTGAAGTTGCGTCACCATAGATTGGCTAATCAAGTGTAA 915 0.5027 MSSSTATATATDTSTVPETAEAEMKTYWCHECDMSVALSSPSSTSSSTLLCPHCHTHFLELMDSPFFPQSDSHSFPASLSLFDTPYLHHLIQNHVLPSDDDDSELEYDDVFEDPLSLLSALPNSTSKSCSDSVPTIIVTSLFLSQLDPGGVLCAVCKDPIGIDAQAKQLPCKHLYHSDCITPWLEHHNSCPLCRFQLVGEKEEGVSQARRIRRQLRTAMMRLSELMEEEDDFYGLRTTLSHIASRHRVLSSAVSGQRNDENPSDSLASPPMTEADSISAGVNGIGFLFAKEILKLRHHRLANQV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02568 304 MobiDBLite consensus disorder prediction 251 274 - -
Accr1g02568 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 209 IPR013083 -
Accr1g02568 304 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 75 197 - -
Accr1g02568 304 Coils Coil 208 228 - -
Accr1g02568 304 Pfam zinc-ribbon 26 62 IPR039525 GO:0061630
Accr1g02568 304 SMART ring_2 153 193 IPR001841 -
Accr1g02568 304 MobiDBLite consensus disorder prediction 251 272 - -
Accr1g02568 304 SUPERFAMILY RING/U-box 144 197 - -
Accr1g02568 304 Pfam Ring finger domain 153 194 IPR001841 -
Accr1g02568 304 ProSiteProfiles Zinc finger RING-type profile. 153 194 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02568 Accr-Chr1 61809547 61812008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02568 20 258 C3H Transcription Factor Family AT3G60080 34.892 7.91e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02568 K11982 - pcin:129316714 342.043