Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02558 ATGGAAAACCATCCCAGAAGCCCAGAGACTCATCCACACCACCACAAGTGGGGCACGTTGGAGGAGCTTTTGCTTGCCTGCGCCGTCCAGCGTCATGGCTTTAAGGATTGGGACGCCGTTGCCACCGAGGTTCAGACCCGAACCACCCTCCTCGTCACCGCCAACCACTGCCGCCAGAGATTCCTCGATCTCAGCCGCCGATTCGCCGCCAACCTCGACGACGCCGTCCCTGACACCCTTCCCGCCGGTGACGACGTCGATCATGTACCCTGGCTTGACGAACTGAGGAAACTCCGCGTCTCCGAACTCCAGGAAGCCGTCCAGCGCTCCGACGACTCCATTCTGTCGTTGCAGCTGAAGGTGAAGAGGTTGGAGGAAGAGAGAGGCAAGAGTTTGAAGGAGAACGTCGGAGAAGAGGAAGAAAAACCGGATCTGGCCGGCTCCGGCGACCCGAAACCACAAAAGGACAAAAAAGGCGGACTTGAAAAAGTTCCAGAGGCGACGAGTGCCGAACCGGCTACGCGGCTTGATGAGGATCATAATATTAAGCAACCGGCAAGTGACGAATCCGACCGGGAAAATCAGTCCGTGAATGAGTCTAACTCGACGGTTTCCGTTGGGAAAACCGGGGAGGGAGAAATTAAATTAGAACCCAACCCGGACCAGGCCGGTCCGAATGAACCGGATGCGGTCGAGAGGAAGGCCAATCCGCTCGGAGAAGAATCTAATAACGGAAGCTACGATGCGGCGGCGAAAGTGCCGACAGGCGATTCACTTCCCCCGAGCGAGGAGAGGAAGGTGGAGGACTCGTCTGAGTTGCGAGACTCAGTGACGAACTCGAGGGATGGTGGTGGTGAGGGAGGAACAAGGGAGAGCAGTGAGGTGCAGAGCTCCGCGAGTTTGACGAGGAAAAGAAAGCCAAGGCGGAGGAAGGAGGGGGAGGAGTCGCCAGAGAACGATGAGGTAGCCATGAAAGTTCAGCCGTTGATTGCGGTGTTGGATTCCATCAAGGGTCACGATCACAACTCATTGTTCCAGCGCCGTCTCGAGAGCCAGGAACTAGAAAAATACAAGAAAGTAGTGCGTCAGCAAATGGATTATGAAACCATACAACGGCGACTCCGAAACGGGACTTATTCCCGCTGCACTCATGCTTTCTTCCGTGATCTCCTCCTCCTCTTCACCAACGCCGCCACATTCTTCCCCAAAGAATCTGCGGAATCATGTGCTGCTCATCAGTTGGGCCAACTTGTCTCCGCCGAGGTTGCACACCGCATTCCGGTGACCCGACCAGAGCCACTTACCAGAAACCCAGACTCACTCCCACCCAACCCATCATCCGCATCAAAACCAAACCCTGATTCTCTCTTGTCAAAACACAAAGCTTCTGCGCCTATACTGTTCAGCAGGAAACGCAGTGCATTCTCTGCCAAACCTTCTATCTCCTCCGCCACGTTTGGCCAAAAGGGTGACATGACAGGTCATGAGAAGAAGAAGCCAGCTGCAGATACAAAACCACCCCCATTGAAGCCGTCCTCTTCTGATACAGACGATGAACCTCCCACGAAAAAGGAAAAGCCCATCACCAGAGTAAGAAGCCTGAGAAGAAGCAACAAAAACCTCACTGTCACCACCGGCAACTCCAACAAGAAGGCAGGCACGATCAGCAAGCCACCAGAGCCGCCAAAACCAGATAAGAGCAAAGCAGAAGGTTCTGCAGGAACAGATAAAAAGAGGAGCGCCGCAGTGGATTTCTTGAAAAGGATAAAGCGAAGTGCTCCGACAGAGGCATTGAGAAGTGGCGGCGGCGGTAGTGGAAGTAGTAGTAAAGGTGGGGGAAGTAGTGGGAAAGACCAGAAGAAGATGATCAGTGGTGGCAAAGGGAAAGAAAAAGCATCCAAGCAGGGTGGTGGCGGCGGCAGTAGTAGCTCCGGGGACAAAAAGAATAATGAGAATGAGAATAGTAGTCAATCGAAGAGGAGTGTAGGTAGGCCTCCAAAGAAGGTGGCAGAAGCTAGTAATGTTTCTGCAAAGCGGGGGAGGGAAAATGGTGGAAAGGAAAAGAGGCCCAAGAAGCGATCAAAGAGGTGA 2091 0.5375 MENHPRSPETHPHHHKWGTLEELLLACAVQRHGFKDWDAVATEVQTRTTLLVTANHCRQRFLDLSRRFAANLDDAVPDTLPAGDDVDHVPWLDELRKLRVSELQEAVQRSDDSILSLQLKVKRLEEERGKSLKENVGEEEEKPDLAGSGDPKPQKDKKGGLEKVPEATSAEPATRLDEDHNIKQPASDESDRENQSVNESNSTVSVGKTGEGEIKLEPNPDQAGPNEPDAVERKANPLGEESNNGSYDAAAKVPTGDSLPPSEERKVEDSSELRDSVTNSRDGGGEGGTRESSEVQSSASLTRKRKPRRRKEGEESPENDEVAMKVQPLIAVLDSIKGHDHNSLFQRRLESQELEKYKKVVRQQMDYETIQRRLRNGTYSRCTHAFFRDLLLLFTNAATFFPKESAESCAAHQLGQLVSAEVAHRIPVTRPEPLTRNPDSLPPNPSSASKPNPDSLLSKHKASAPILFSRKRSAFSAKPSISSATFGQKGDMTGHEKKKPAADTKPPPLKPSSSDTDDEPPTKKEKPITRVRSLRRSNKNLTVTTGNSNKKAGTISKPPEPPKPDKSKAEGSAGTDKKRSAAVDFLKRIKRSAPTEALRSGGGGSGSSSKGGGSSGKDQKKMISGGKGKEKASKQGGGGGSSSSGDKKNNENENSSQSKRSVGRPPKKVAEASNVSAKRGRENGGKEKRPKKRSKR 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02558 696 Gene3D - 295 427 IPR036427 GO:0005515
Accr1g02558 696 MobiDBLite consensus disorder prediction 636 662 - -
Accr1g02558 696 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 6 696 - -
Accr1g02558 696 CDD Bromodomain 332 422 - -
Accr1g02558 696 CDD SANT 16 61 IPR001005 -
Accr1g02558 696 MobiDBLite consensus disorder prediction 475 489 - -
Accr1g02558 696 MobiDBLite consensus disorder prediction 516 532 - -
Accr1g02558 696 Coils Coil 107 141 - -
Accr1g02558 696 Pfam Bromodomain 331 407 IPR001487 GO:0005515
Accr1g02558 696 MobiDBLite consensus disorder prediction 172 195 - -
Accr1g02558 696 MobiDBLite consensus disorder prediction 561 594 - -
Accr1g02558 696 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Accr1g02558 696 SUPERFAMILY Homeodomain-like 13 65 IPR009057 -
Accr1g02558 696 Gene3D - 9 64 - -
Accr1g02558 696 MobiDBLite consensus disorder prediction 130 323 - -
Accr1g02558 696 MobiDBLite consensus disorder prediction 601 615 - -
Accr1g02558 696 MobiDBLite consensus disorder prediction 534 554 - -
Accr1g02558 696 MobiDBLite consensus disorder prediction 259 276 - -
Accr1g02558 696 ProSiteProfiles Bromodomain profile. 337 408 IPR001487 GO:0005515
Accr1g02558 696 SMART bromo_6 322 427 IPR001487 GO:0005515
Accr1g02558 696 MobiDBLite consensus disorder prediction 130 164 - -
Accr1g02558 696 MobiDBLite consensus disorder prediction 473 696 - -
Accr1g02558 696 SUPERFAMILY Bromodomain 313 423 IPR036427 GO:0005515
Accr1g02558 696 MobiDBLite consensus disorder prediction 282 300 - -
Accr1g02558 696 MobiDBLite consensus disorder prediction 428 458 - -
Accr1g02558 696 SMART sant 13 67 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr1g02558 Bromodomain 1.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02558 - - pcin:129316279 1041.57