Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02555 ATGATTAGAGGAACAAGAGGTTACGTGGCACCAGAATGGTTCAAGAACACTCCTATTACCGCAAAAATAGATGTTTATAGCTATGGAGTGATGCTACTCGAGATTTTATTTTGCAGGAAAAGCCTTGACATGGGAAGAGAGAATGAAGAGGAAGTGATACTGGTTGACTGGGTTTATGACTGCTTCAAAGCAAGAAAATTAAGCAAACTTGTAGAGGAAGATGAAGAGGCTAGAAATGACATGAAGAGGTTAGAGAGGCTAGTGATGGTAGCACTTTGGTGCATACAAGAGGACCCATCTTTGAGACCTCCCATGAAGAAAGTCATCCAAATGCTTGAAGGTGTGGTGAATGTGTCTGTGCCACCATGCCCTTCTCTTTTTAGTTCTACTTCTTTCTGTTAA 402 0.4129 MIRGTRGYVAPEWFKNTPITAKIDVYSYGVMLLEILFCRKSLDMGRENEEEVILVDWVYDCFKARKLSKLVEEDEEARNDMKRLERLVMVALWCIQEDPSLRPPMKKVIQMLEGVVNVSVPPCPSLFSSTSFC 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02555 133 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Accr1g02555 133 Pfam Protein kinase domain 3 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02555 133 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02555 133 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 125 - -
Accr1g02555 133 Coils Coil 64 87 - -
Accr1g02555 133 SUPERFAMILY Protein kinase-like (PK-like) 2 127 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02555 Accr-Chr1 61696077 61696478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02555 2 114 Receptor kinase-like Gene Family AT1G60800 39.823 1.95e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr1g02555 Pkinase 1.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02555 - - fve:101307160 226.868