Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02554 ATGTGGAGATTTAAGCAATTCACACAAAAAGAGCCAGCTGGGCTTGAAGGACGCACTATAGATGTTGGCAATCTTAAAATAAATGTTCAAAAGGCCATTGCAGAAGGGGGTTTCTCTTGTGTCTACTTGGCTCGTGATTGTGCACACATGTCAAAACAGTTTGCTTTGAAGCACATTATTTGCAATGATGAAGAATCCCTCGGATTGGTCAAGAAGGAGATCTCAGTGATGAAGTCATTGAAAGGGCATCCTAATATTGTCACACTCCATGCACATACAATTTTTGATATGGGCAGGACAAAAGAGGCATTCCTGGTGATGGAATTCTGTGAAAAGTCTCTGGTGCAGGTGCTGGAGAGCCGAGGAGCAGGGTATTTTGATGAGCAACGGGTTTTACTGATCTTCAGGGATATATGTAATGCAGTTTTTGCAATGCACTGCCAATCCCCACCTATTGCTCACCGAGACTTAAAAGCTGAAAATCTTCTATTAACTTCGGATGGCCTGTGGAAATTGTGCGACTTTGGAAGCACATCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAGGATAATATCAGAAAGTACACAACTCCTGCCTACAGGGCGCCTGAGATGTGGGATCTGTTTCTGAGAGAAGTCATTAATGAAAAAGTGGACATATGGGCTCTTGGGTGTCTTCTCTTTCGCATATGCTACTTCAGGAGCGCATTTGATGGAGAATCCAAGCTTCAAGTCCTTAATGGAAACTATCGCATCCCTGATTTACCTAAATATAGTTCATCCATTGTAGACTTAATCAGAGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGTCCGGTTTCGGGTTAATGAGCAGTTACCTGTTAATTTGCAGAAGTCATTACCTGATACACCACCCGAATTTTCTTGTTCCAACTATCATGAAGGTGCATCAAAGCCTGCTAACAGATCAACCCCAGTGCCTCGTAGGAGTCCTCCCCTGCCATCTGTAGAACACAGAACTTCTTCACATCCATCCCTTTCTTCTAGGGGAGGTGGAGGTGGGGGCCAGATTGGTGCTTTCTGGTCCACCCAGCACGCACAAAATTCACTTGCCACAGAAGGAAAGGGCAAACCCATATTTGAAGAAAAACCAGCTGTCCATACTGTTTCATCAAAACTTGATAGAATTTGTCCCGAGAACAATCAATCACCTAGCACTGTTAGCCCTAACAAAGTGGTCAATGCTCAGTCCCAAACTTTGAAAAGCAGTTCCTATGGAAAATCAAGTAAGCCTGATACTGGTTCTTCCAAGGACTTTGAAATAAATTTTTTTCAAGGTCAAGATCATAGTAGTGAGAAGCGAATGTCATCAAGTAGAGAAAACAAAACTACTTTTCAAGACCAGGCTTTTAACGCTCTTGTTGCTGAATTTGATACAAGTAAATTCAACTCTGGACCCAGTTATAAATCTGATATGGAAGCAGCATTAGAATCTGAGGTGGAGAAAATGAAGGAGCAGCTGAAGGAAGTTAACCTGGAAAAAGCTCAAGTAACTTCCAAGTATGAAAAGCTTACTTCCATCTGCCGATCTCAAAGACAAGAACTACAAGATCTCAAGCAGGCACTTGCAGCTAAAACCCCCTCACCAAATAAGGAGGCTCTTAGAACAGCATCAACAATTGCAACATCTACTGCTATGAGATGTGGGACTGTTCAGGAACAAGTGCAAAATAAAGCTCAATGGAAAACTCCTGGTCCTGAACCTAAGTCGTCATGGCAAGCTTTTCCAGAACAACAGCTGCCGCACTCTGCTTCGGCGTACAATGCTTCCAAGTGTTTCGGGAGTAGGATTGATCAGCAAAACAATCAGCCTGCCCGGCCAACTGGAAGCCCGCAAATGCCTAGGCGTACTACTGATGGGAGTAATTCTCAGGCTAAGTCAGCTTCTCAACCTGCGGGATGGGCTGGTTTTTAA 1989 0.4369 MWRFKQFTQKEPAGLEGRTIDVGNLKINVQKAIAEGGFSCVYLARDCAHMSKQFALKHIICNDEESLGLVKKEISVMKSLKGHPNIVTLHAHTIFDMGRTKEAFLVMEFCEKSLVQVLESRGAGYFDEQRVLLIFRDICNAVFAMHCQSPPIAHRDLKAENLLLTSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFRSAFDGESKLQVLNGNYRIPDLPKYSSSIVDLIRDMLQARPDDRPDITQVRFRVNEQLPVNLQKSLPDTPPEFSCSNYHEGASKPANRSTPVPRRSPPLPSVEHRTSSHPSLSSRGGGGGGQIGAFWSTQHAQNSLATEGKGKPIFEEKPAVHTVSSKLDRICPENNQSPSTVSPNKVVNAQSQTLKSSSYGKSSKPDTGSSKDFEINFFQGQDHSSEKRMSSSRENKTTFQDQAFNALVAEFDTSKFNSGPSYKSDMEAALESEVEKMKEQLKEVNLEKAQVTSKYEKLTSICRSQRQELQDLKQALAAKTPSPNKEALRTASTIATSTAMRCGTVQEQVQNKAQWKTPGPEPKSSWQAFPEQQLPHSASAYNASKCFGSRIDQQNNQPARPTGSPQMPRRTTDGSNSQAKSASQPAGWAGF 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02554 662 SUPERFAMILY Protein kinase-like (PK-like) 28 339 IPR011009 -
Accr1g02554 662 MobiDBLite consensus disorder prediction 581 655 - -
Accr1g02554 662 Coils Coil 494 546 - -
Accr1g02554 662 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02554 662 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Accr1g02554 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Accr1g02554 662 PANTHER SERINE/THREONINE PROTEIN KINASE 1 651 - -
Accr1g02554 662 Gene3D Transferase(Phosphotransferase) domain 1 10 306 - -
Accr1g02554 662 MobiDBLite consensus disorder prediction 300 364 - -
Accr1g02554 662 CDD STKc_GAK_like 26 298 - -
Accr1g02554 662 SMART serkin_6 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02554 662 MobiDBLite consensus disorder prediction 581 662 - -
Accr1g02554 662 MobiDBLite consensus disorder prediction 340 354 - -
Accr1g02554 662 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02554 662 MobiDBLite consensus disorder prediction 422 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02554 Accr-Chr1 61683282 61686410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02554 26 289 Miscellaneous Gene Families AT2G34180 29.562 8.31e-21 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Accr1g02554 Pkinase 7.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02554 K08853 - gmx:100780879 895.19