Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02541 ATGGGAGGTGATAGGAGGAATAATGAGCTCAAGTTTGCAAGTAGAATTCACATGAGAGCTTGTCTTGAAGGTGGATATCATGTGCTAGACGAATCAGCTTTGTACACAAGCGATCAAAGACCAACATCAAGGCAGCTATGGAAGCCTCCCATTGGGATTCTTGAAGTGGGTGTTTTAGGAGCACAAGGCCTTCTTCCAATGAAGATGAAGAATGGACATGGCAGCACGGATGCTTATTGCGTCGCTAAGTACGGCCAGAAATGGGTCCGAACGAGGACAATTCTCAATACTTTCAATCCCAAATGGAATGAGCAATACACATGGGAGGTTTACGATCCTTGCACTGTGATCACACTTGGAGTTTTTGATAATTGCCACTTGAGAGATGGAAATTCAACCCCTGATTCTCAAATAGGCAAGGTAAGAGTTCGGCTTTCTACACTAGAAGGTAATAAGACCTACATCCATTCTTTTCCACTTCTTGTCTTGCATCCACTTGGGGTCAAGAAGATGGGGGAGCTTAACCTTGCAATCAGGTTCACCACTTTCTCACTTTTCAATATGATTCAAATTTATGCCCATCCTTTGCTTCCCAAGATGCATTATTTACACCCATTTACAGTGAACCAATTAGAAAATCTAAGATACCAAGCCATGAATCTAGTAGCTATGAGGCTTGGCCGAGCCGAGCCACCATTGAGAAAGGAGGTGGTGGAGTACATGTTGGATGTGGATTCTCATTTGTGGAGCATGAGAAGAAGCAAAGCAAACTTCTTTAGAATCATGTCACTCTTATCTAGATTGATCTCAATCCAAAGATGGTTCAGTGATGTTTGCCAATGGAAGAACCCTATCACATCAATTCTGGTTCACATTCTGCTTCTGATACTAATCTTCCACCCAGACTTGATACTTCCAACCATGTTTTTATATATATTCTTCATTGGAATATGGAACTATAGGTTCCGTCCTAGACACCCACCTCATATGGATCCTCAGATATCTTATGCAGAAGCTGTAGAACCAGATGAACTTGATGAGGAGTTTGATACATTCCCAACTTCAAGATCCATTGATGTGGTGAGAATGAGGTATGACAGGCTTAGGAGTATCGCAGGGAGGATTCAGACTGTGGTCGGGGACATTGCCGCACAAGGTGAGAGGATTCAGTCTTTGTTGAGCTGGAGAGACCCCAGAGCAACCACCATCTTCATCTTCTTCAGCCTTTCCGTGGCAGTGTTTCTTTACGCAACACCATTTAGATTGGTGACTGTGGCCGCCAGTATGTATGGCTTGCGCCACCCAAAGTTTCGACGTAAGCTGCCTTCTGTTCCCAGCAATTTCTTCAAGAGGCTGCCTTCTAAGACAGATAGTTTGCTGTAA 1383 0.4367 MGGDRRNNELKFASRIHMRACLEGGYHVLDESALYTSDQRPTSRQLWKPPIGILEVGVLGAQGLLPMKMKNGHGSTDAYCVAKYGQKWVRTRTILNTFNPKWNEQYTWEVYDPCTVITLGVFDNCHLRDGNSTPDSQIGKVRVRLSTLEGNKTYIHSFPLLVLHPLGVKKMGELNLAIRFTTFSLFNMIQIYAHPLLPKMHYLHPFTVNQLENLRYQAMNLVAMRLGRAEPPLRKEVVEYMLDVDSHLWSMRRSKANFFRIMSLLSRLISIQRWFSDVCQWKNPITSILVHILLLILIFHPDLILPTMFLYIFFIGIWNYRFRPRHPPHMDPQISYAEAVEPDELDEEFDTFPTSRSIDVVRMRYDRLRSIAGRIQTVVGDIAAQGERIQSLLSWRDPRATTIFIFFSLSVAVFLYATPFRLVTVAASMYGLRHPKFRRKLPSVPSNFFKRLPSKTDSLL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02541 460 Pfam Plant phosphoribosyltransferase C-terminal 305 460 IPR013583 -
Accr1g02541 460 Gene3D C2 domain 34 184 IPR035892 -
Accr1g02541 460 ProSiteProfiles C2 domain profile. 35 158 IPR000008 -
Accr1g02541 460 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 52 182 IPR035892 -
Accr1g02541 460 Pfam C2 domain 52 160 IPR000008 -
Accr1g02541 460 FunFam C2 domain-containing protein 35 184 - -
Accr1g02541 460 CDD C2D_MCTP_PRT_plant 53 177 IPR047255 -
Accr1g02541 460 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 7 460 IPR047259 -
Accr1g02541 460 SMART C2_3c 53 157 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02541 Accr-Chr1 61553703 61555085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02541 4 460 Lipid Metabolism Gene Families AT5G48060 72.885 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02541 - - pop:7463869 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02541 1 61553703 61555085 Accr1g02541 1 61553703 61555085 ECH