Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02530 ATGGATGACGGAGTGCCTCCAAGCCTTTTTGTTAATGATGGTTCATTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGAAAAATGAAAAATTAGAGGATTCTAAACCTATTAAAATTGTCTCAGGGTCTTTGACTCCTAATCTTTCCATGAATAAAAGGACCTCTGCAGACTTGAAGGCTTATAACACACAGAAAACATCCCAGGCTGGTTCCAGTGGCAAACTTGCATTCAGTATAAAACAAAAGTCTAAGCTAGTGCCTCCACCTGTTAAGTTAAGTGCAGATGATGAAGAAGAAACAGATGGTAGTGATGTTTCAAGCGATGCACCCCTAAAACGACAAAGGTTGGGGAGTGAAGATGGCATTGACCGATCATTAAGACAATCTGATGATGCACCTTCTTCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGAGAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGTCAAAAAAATCCAGGGAATACACCTTTCAAGTTTTTATTTGATGAGAAATGTGCCGACTACAAATATTATGAATATCGACTAGCCCAGGAGGAAAAGGCTCTAGCGAAGCCCCAGGAATCACAGACATCACATAATGGGGGTACTAGCTCCTCATCTTCTAGATCAACCAATGTTCCTCGGAGATCATCTCAGCCGCATTCAGCTTACCAAATTCCTGCATCTGCTCTGTATGAAAGTTCTGAAGATCCTGGAGCTTATGGATCTCCAGGTCAAGCAGCCCCAGGAGGAAGCAATAATGAAACTGGTGGATCATCGAATGCTGATTCTTTAGCATTGATGGAGTTCTACATGAAGAAGGCTGCACAGGAAGAGAAGATGAAAAGACCTAAGCAATCTAAAGATGAGATGCCCCCTCCTGCATCTCTTCAAGCTTCTTCTAAGAAAGGTCATCACATGGGTGATTACATTCCCCAGGAAGAACTAGAGAAGTTCATGGCTAACTGTAATGATGCAGCAGCACTGAAAGCTGCTAAGGAGGCTGCAGAGAAGGCTAAAATTCAGGCTGATAATGTGGGTCACAAGCTTTTGTCAAAAATGGGATGGAAAGAAGGTGAGGGTCTGGGCAGCTCCAGGAAAGGTATTTCAGATCCAATCATGGCCGGTAATGTTAAGATGAACAATTTGGGGGTTGGTGCAAACAACCCTGGGGACGTGACCCCTGAAGACGACATATACGAGCAATACAAAAAGAGGATGATGCTTGGTTATCGTTACAGACCCAATCCTCTGAACAATCCTCGCAAGGCTTATTACTGA 1311 0.4317 MDDGVPPSLFVNDGSFMERFKQLQQEQKNEKLEDSKPIKIVSGSLTPNLSMNKRTSADLKAYNTQKTSQAGSSGKLAFSIKQKSKLVPPPVKLSADDEEETDGSDVSSDAPLKRQRLGSEDGIDRSLRQSDDAPSSPSDPTVKKVAEKLASFVAKNGRQFEDVTRQKNPGNTPFKFLFDEKCADYKYYEYRLAQEEKALAKPQESQTSHNGGTSSSSSRSTNVPRRSSQPHSAYQIPASALYESSEDPGAYGSPGQAAPGGSNNETGGSSNADSLALMEFYMKKAAQEEKMKRPKQSKDEMPPPASLQASSKKGHHMGDYIPQEELEKFMANCNDAAALKAAKEAAEKAKIQADNVGHKLLSKMGWKEGEGLGSSRKGISDPIMAGNVKMNNLGVGANNPGDVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02530 436 SUPERFAMILY Surp module (SWAP domain) 135 197 IPR035967 GO:0003723|GO:0006396
Accr1g02530 436 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 6 39 IPR040169 -
Accr1g02530 436 SMART G-patch_5 351 398 IPR000467 GO:0003676
Accr1g02530 436 MobiDBLite consensus disorder prediction 106 128 - -
Accr1g02530 436 MobiDBLite consensus disorder prediction 198 274 - -
Accr1g02530 436 MobiDBLite consensus disorder prediction 286 315 - -
Accr1g02530 436 MobiDBLite consensus disorder prediction 257 273 - -
Accr1g02530 436 Coils Coil 339 359 - -
Accr1g02530 436 SMART surpneu2 143 197 IPR000061 GO:0003723|GO:0006396
Accr1g02530 436 MobiDBLite consensus disorder prediction 41 79 - -
Accr1g02530 436 ProSiteProfiles SURP motif repeat profile. 145 188 IPR000061 GO:0003723|GO:0006396
Accr1g02530 436 Pfam Surp module 145 194 IPR000061 GO:0003723|GO:0006396
Accr1g02530 436 MobiDBLite consensus disorder prediction 24 144 - -
Accr1g02530 436 Gene3D Surp module 128 200 IPR035967 GO:0003723|GO:0006396
Accr1g02530 436 ProSiteProfiles G-patch domain profile. 353 400 IPR000467 GO:0003676
Accr1g02530 436 Pfam G-patch domain 354 397 IPR000467 GO:0003676
Accr1g02530 436 MobiDBLite consensus disorder prediction 200 239 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02530 339 409 C2H2 Transcription Factor Family AT5G26610 41.667 1.94e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02530 K13096 - gmx:100813337 620.542