Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02529 ATGAGTGCTGTCTATAGTCCTGCTCTCAAGTACTCAGGAATGGATCCTAGAAACATTCAACAACAACAACAACGTTGTCATCCTCATCATCAGCCGCAGCAGCAGCAGCAAATTTCTGGGCTTTTGAGGTATCGCTCCGCTCCAAGCTCATTGGTGGCAAACCTGGTGGAAAGAGAAGGAGGTTGCAGAGGCTTGGAACATCAACAACAACATGAGAGAAGATGTTATTTTCAATCCCTCGATGCAGAAATGGAAGGAATGTTAGATTCGAACAACGGATGGAGCAATGTGAAGCATGAAGGAGGAGGAGGAGAAAGAGGAGGAGGATGTTCTGTTTTCTGCAATGAGGCTAATCAGCTGATTTATGATTCTCGTGAAGGATTCCAAGAATATGGAGCAGGTGGGTCATGCTCAAGTGTGATGATGAACACTGTTATGGGTTCCCAGAACTCCACTCAATCTAAAATGGCTTCGGGCAATTGTTCCAATAATCTTCTCCTCAGGCAGAAGACCTCACCTCCTGGGTTTTTCTCCAATTTCTCTCTCACAAATGCAACCTTCTCATCTGAGCCATCTTCCTCTTGCCCAAGAAGGATGCCACAGATTGCAGAAAATAGAAATGAAACCCTAGAAGACGGAGCAAGAATCATTGTTGAAACTAGAAGCATGAGAAATGATAATGAAAGACACCACAAAAGTTATATGCCCAGTTACACAAGTGACTTATGGGAAAGTTCTTCATTCACTGCTCATAAAACAGCAAGTGACAGCAATGAATTCATGTTTTCTACTTCAGATGCCTCCGAATCTCAGCAAGCAGATCAGTTTGGACATCAGAATGTTGGCTTAACTCATCAAATGAGTTTGCCTATTAGTTCATCAACAAAGAAAGATGGCAGAGAGATGATTTTGCATATTCAAGGATCTGTTCCCTGTAAAATTAGAGCCAAAAGAGGCTTTGCTACTCACCCAAGAAGCATTGCAGAGAGGGTAAGAAGAACAAGGATTAGTGAAAGAATAAAGAAGCTGCAAGAGCTTTTCCCAAAATCAGACAAGCAAACAAATACAGCTGATATGTTGGATTTGGCGGTTGCTTATATTAAAGACCTGCGAAAACAAGTCAAGATACTAACAGATAAAAGGGCAAGGTGCATATGCTCAGGTGTTCAAAAGCAATAG 1179 0.4207 MSAVYSPALKYSGMDPRNIQQQQQRCHPHHQPQQQQQISGLLRYRSAPSSLVANLVEREGGCRGLEHQQQHERRCYFQSLDAEMEGMLDSNNGWSNVKHEGGGGERGGGCSVFCNEANQLIYDSREGFQEYGAGGSCSSVMMNTVMGSQNSTQSKMASGNCSNNLLLRQKTSPPGFFSNFSLTNATFSSEPSSSCPRRMPQIAENRNETLEDGARIIVETRSMRNDNERHHKSYMPSYTSDLWESSSFTAHKTASDSNEFMFSTSDASESQQADQFGHQNVGLTHQMSLPISSSTKKDGREMILHIQGSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQELFPKSDKQTNTADMLDLAVAYIKDLRKQVKILTDKRARCICSGVQKQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02529 392 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 384 - -
Accr1g02529 392 Gene3D - 322 387 IPR036638 GO:0046983
Accr1g02529 392 FunFam Transcription factor bHLH130 family 321 390 - -
Accr1g02529 392 Pfam Helix-loop-helix DNA-binding domain 326 370 IPR011598 GO:0046983
Accr1g02529 392 MobiDBLite consensus disorder prediction 1 38 - -
Accr1g02529 392 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 320 370 IPR011598 GO:0046983
Accr1g02529 392 CDD bHLH_AtbHLH_like 325 377 IPR045239 -
Accr1g02529 392 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 323 381 IPR036638 GO:0046983
Accr1g02529 392 SMART finulus 326 376 IPR011598 GO:0046983
Accr1g02529 392 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02529 Accr-Chr1 61393822 61396291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02529 39 387 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 34.211 1.70e-38 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g02529 HLH 4.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02529 - - pcin:129314949 524.628