Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02525 ATGTCCGAAGGTCTGAGAGTGAACATAATCGAGCGGAGCCAAGTCTCTGCCCCTCCACATTCAACCTCACCTACTTCTCTTCCTCTCACCTTCCTTGACCTTCCATGGCTCTTCTTCTCCCCAAACCAACCTCTCTTCTTCTTCGACTTCCCCTTCTCTCTCACACACTTCATTGCCTTCACCCTCCCTAACCTCAAGCTCTCTCTCTCCCTCACTCTCCAACACTACTTCCCCTTCGCCGGAAACTTCGTGCCCTCGCTGGAGCCTTCCAAGCCCCACATTGTCTATTCGGAATCAAACTCTGTTTCCCTGGTGGTGGCGGAATCGTCTGACGACTTTAATTATTTCTGTAGCAACCATGCCAGAGACGTCAATTCCTTCCATGCACTTGTTTCGAATCTCAAATCTGAAAAGAAGGAGATTGCGTTGATGGCAATTCAGGTTACTGTTTTCCCAGATTCTGGTATTTGTATTGGAATCACTTATCAGAACATCATTGCAGATGGAAGAACCTTTCACAATTTCATGAATACTTGGGCTGCGTTTTGTTCCTCCCAAGATTCATCCTTTCCACAAAAATCCCTACCATTTTATGATCGGGGTGTGATTGTGGATTCTCATGGGCTTGAAGAGGTTTTCTTGAAGCAATATTGGCGCCGGAAGAGAACGAATTTCATCACTGTCCACGACACTAAGGTCAAGTCATCGTCATTGAGCGACGTGGTTCGAGCCACGTTCTTGATGGGTCCAACTCAAATGGAGAACATCAAGCGCTTCATTGTTTCATCATGCAGAGAAAAGAACGAGTCCCAGCCTGAGCACTTATCTCCTTACGTCTTAGCTTGTGCTTTTCTATGGGTTTGCATGCTCAAAACTCAACAAATCACCAACAACAACAGCGAGGATGTTCGTTATAAGGATCCGGCTTATTTCGGGTTCATTGCCGGAGGGATGACCCGGTTGCAGTTTCCGGTGCCGGCGACTTATCTTGGGAACTGCGTGGGGTTCGGCCTTGCATCGGCAATGAGGGGTGAGTTACTTAGGGAAGATGGAATTGTTGTGGCAGCGAGAGCCATTGGAGGCACAATTAAGAAGCTGGATCAGGGGATGCTTGTCGGGGCAGAGAAATGGGTGTCGGATTGGGAGGGGATAAACGGGTCGGAGCTCCATGTGGTGGCAACATGGTCCCCAAAATTAAAGCTATACGGAACAGATTTTGGGTGGGGAGGGCCAAGGAAGATAGAGGAGATATCAATTGATAAGAGTAGAGCGATTTCACTTATCAGCAGCAGAGACGTTGTCGGGGGCATGGAGATAGGCTTGGCCCTACCTCGTGACAAAATGGATTCTTTTACCGTTTTCTTCAACCAAGGTCTTGTGGTCTGA 1386 0.4805 MSEGLRVNIIERSQVSAPPHSTSPTSLPLTFLDLPWLFFSPNQPLFFFDFPFSLTHFIAFTLPNLKLSLSLTLQHYFPFAGNFVPSLEPSKPHIVYSESNSVSLVVAESSDDFNYFCSNHARDVNSFHALVSNLKSEKKEIALMAIQVTVFPDSGICIGITYQNIIADGRTFHNFMNTWAAFCSSQDSSFPQKSLPFYDRGVIVDSHGLEEVFLKQYWRRKRTNFITVHDTKVKSSSLSDVVRATFLMGPTQMENIKRFIVSSCREKNESQPEHLSPYVLACAFLWVCMLKTQQITNNNSEDVRYKDPAYFGFIAGGMTRLQFPVPATYLGNCVGFGLASAMRGELLREDGIVVAARAIGGTIKKLDQGMLVGAEKWVSDWEGINGSELHVVATWSPKLKLYGTDFGWGGPRKIEEISIDKSRAISLISSRDVVGGMEIGLALPRDKMDSFTVFFNQGLVV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02525 461 Gene3D - 7 229 IPR023213 -
Accr1g02525 461 PANTHER - 7 459 - -
Accr1g02525 461 Pfam Transferase family 6 452 - -
Accr1g02525 461 Gene3D - 238 461 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02525 Accr-Chr1 61346161 61347546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02525 5 455 Monolignol Biosynthesis Gene Families AT5G48930 22.432 1.95e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02525 - - qsu:112036458 517.309