Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02518 ATGGGAAGGGACAAGAACAATAGTAGTAGTAGTAAGAACAATGGCAACAACAATGTTGTGAAGCTAAGGAAGGGGTTGTGGTCGCCGGAGGAGGATGAGAAGCTGATAAGGTACATGTTGACCAACGGACAAGGTTGTTGGAGTGACATTGCCAGAAATGCAGGCCTTCTACGTTGTGGCAAGAGTTGTCGCCTTCGTTGGATTAATTATCTCAGACCTGACCTTAAGCGAGGTGCTTTCTCTCTCCAAGAAGAACAACTCATTCTTCATTTTCATTCCATTCTTGGCAATAGGTGGTCTCAGATAGCAGCACGTCTTCCAGGACGAACAGACAACGAGATTAAGAATTTTTGGAACTCGACCTTAAAGAAAAGGATGAAAAACAATACTACTTGTACTACTACTGCTACTACTACTTCCACTGCTACTCCTTCGCCAAACAACAGTACAGACTCTTCATCAAATCATATTATTCTCAATGGCATTACCACCACCTCCATGCCCTTCATCAACATGACCATGTGCATGGACTCATCACCTTCATCAATATCATCATCTTCATCAGCATCTGTACAATCCATGCATGCCGCCGCCACGGCTTTTGGTGGTGACCACCAGTTAATGGAGTACCCCTTTTCCATGTTGAACAGTAATAACAGTAATTTTCCTTTTGACATGCCTGCATGCTTAGCCCAAGTTGGCGGCGGCGGCGGCATGGTGGAGGATGGATTTTATGGTGGTGATTATGGTAATGGGGTGGTGTTGGAGGGAGAAGATAGTAAAATAATGGGGTTAGAAAGAGAGCTGTGTCTTCCTCATTTGGAGAGTAGAAGCATGGAAGAGAGGTATAATAGTGGTACTAGTGTTGGTCCTATTGATGTGAGAAGTCATATCAACAACAACAACAACCATTTTAATAATGGTTGCTTCAATAACACTGATCATCATCATCAGGACTTGGTTGGATATGGAAATAATAATCATGGGCAATCAGGGGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTGATGCAAGATATATCCTCTTTTCCTTTCCTTGATTTCCAAGTTGAATGA 1083 0.4275 MGRDKNNSSSSKNNGNNNVVKLRKGLWSPEEDEKLIRYMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSLQEEQLILHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRMKNNTTCTTTATTTSTATPSPNNSTDSSSNHIILNGITTTSMPFINMTMCMDSSPSSISSSSSASVQSMHAAATAFGGDHQLMEYPFSMLNSNNSNFPFDMPACLAQVGGGGGMVEDGFYGGDYGNGVVLEGEDSKIMGLERELCLPHLESRSMEERYNSGTSVGPIDVRSHINNNNNHFNNGCFNNTDHHHQDLVGYGNNNHGQSGENLRMGEWDLEGLMQDISSFPFLDFQVE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02518 360 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Accr1g02518 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 71 IPR017930 -
Accr1g02518 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Accr1g02518 360 MobiDBLite consensus disorder prediction 132 155 - -
Accr1g02518 360 Gene3D - 79 149 - -
Accr1g02518 360 Pfam Myb-like DNA-binding domain 77 121 IPR001005 -
Accr1g02518 360 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Accr1g02518 360 PANTHER MYB DOMAIN PROTEIN 55 17 283 - -
Accr1g02518 360 CDD SANT 79 122 IPR001005 -
Accr1g02518 360 Gene3D - 21 77 - -
Accr1g02518 360 SUPERFAMILY Homeodomain-like 22 118 IPR009057 -
Accr1g02518 360 SMART sant 76 124 IPR001005 -
Accr1g02518 360 SMART sant 23 73 IPR001005 -
Accr1g02518 360 CDD SANT 27 71 IPR001005 -
Accr1g02518 360 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Accr1g02518 360 FunFam MYB transcription factor 21 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02518 Accr-Chr1 61235908 61238922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02518 15 360 MYB Transcription Factor Family AT3G08500 46.518 5.76e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g02518 Myb_DNA-binding 8.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02518 K09422 - zju:107417581 343.969