Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02515 ATGGAGTCAGAAGGGGAAGCTGGGACAAAGCCAAAGACGGCATTGGGTGCCCAAGTGTGCCAGATATGTGGTGATAGTGTTGGGAAGACTGTGGATGGTGAGCCATTCATTGCCTGTGATGTTTGCGCTTTTCCTGTTTGCAGGCCGTGCTATGAGTATGAAAGGAAGGATGGAAACCAGTCTTGCCCCCAGTGCAAAACCCGGTACAAGAGACACAAAGGAAGTCCTGCAATTCTTGGAGATGGGGAGGAGGATGGTGTTGCTGATGATGGTACTAGTGACCTGAATTATGATTCAGAGAATCAGAACCAAAAGCAAAAAATTTCAGAGCGAATGCTAAGTTGGCACATGACATATGGACGGACTGAGGAGATTGGTGCTCCAAATTATGATAAAGAAGTTTCTCATAACCACATTCCTTTGCTAACTAGTGGACAAGAGGTCTCTGGAGAATTATCTGCAGCCTCACCTGAGAGGCTTTCAATGGCATCCCCTGGAGGTCCTGGTGGGAAGCGTGTCCATAGTCTTCCATATTCATCTGATATTAATCAATCACCTAATATTAGGGCTGTGGATCCTGGATTGGGCAATGTAGCTTGGAAAGAAAGGGTTGATGGTTGGAAGATGAAGCAGGAAAAGAATGTTGTTCCAATGAGCACAGGCCAGGCTGCTTCTGAAAGAGGGGCTGGAGACATTGATGCTAGCACTGATGTGCTTGTGGATGATTCCTTGTTAAATGATGAGGCTCGGCAACCTCTTTCCAGGAAAGTTTCAATTCCATCATCTAGGATAAATCCCTACCGCATGGTCATTATTCTGCGGCTGATTATCCTCTGTTTTTTCTTGCATTACCGAATAACAAATCCTGTGCGCAATGCATATCCACTGTGGTTAGTATCAGTTATATGTGAGATTTGGTTTGCCATTTCCTGGATATTGGATCAATTCCCTAAGTGGTTACCGGTAAACCGGGAAACATATCTTGACAGACTAGCCCTGAGATATGACCGGGAAGGGGAACCATCACAACTAGCAGCTGTTGATATATTTGTCAGTACTGTTGACCCATTGAAGGAGCCTCCACTTGTGACTGCAAATACTGTTCTGTCTATTCTTGCTGTTGATTATCCCGTGGATAAGGTCTCTTGCTATGTCTCTGATGATGGTGCTGCTATGCTAACATTTGAAGCTCTTTCAGAGACAGCAGAATTTGCAAGGAAATGGGTTCCTTTCTGCAAAAAATACAACATTGAACCTCGGGCACCAGAGTGGTACTTTACGCAAAAGATTGACTACTTAAAAGACAAGATTCAAACATCATTCGTCAAAGATCGTAGAGCAATGAAGAGAGAATATGAAGAGTTTAAAGTTCGTGTTAATGCACTTGTTGCAAAGGCACAGAAAATTCCAGAAGAAGGATGGGTAATGCAAGATGGTACTCCATGGCCTGGAAACAACACTAGAGATCATCCTGGAATGATCCAGGTTTTCTTGGGCCAAAGTGGAGGGCTTGACACAGAGGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGATTTCAACATCACAAGAAGGCCGGTGCCATGAATGCCCTTGTCCGAGTTTCAGCTGTCCTTACAAATGGACCTTTTCTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAAGCCTTGAGGGAAGCCATGTGCTTTATGATGGATCCCAACCTAGGGAAACATGTTTGCTATGTTCAGTTCCCGCAGAGGTTTGATGGTATTGACAGGAATGATCGATATGCCAATCGTAATACAGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGCCCAGTCTATGTGGGCACTGGATGTGTCTTCAACAGAACAGCTTTATATGGTTATGAACCTCCTCTCAAACCCAAACATAAAAAGCCAGGGTTGCTGTCTTCATTATGTGGTGGAAGTCGAAAGAAGAGTTCAAAATCTAGTAAGAAAGGTTCTGACAAGAAAAAATCTAGCAAGCATGTTGACCCAACCATCCCCATATACAATCTGGAAGATATAGAAGAAGGAGTGGAAGGTGCTGGATTTGATGATGAGAAGTCACTACTCATGTCCCAAATGAGCCTTGAGAAAAGGTTTGGTCAATCTGCTGTCTTTGTTGCTTCCACGCTTATGGAGAATGGCGGTGTTCCTCAGTCTGCTACTCCTGATACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGTGGTTACGAGGACAAATCAGATTGGGGAAGTGAGATAGGATGGATCTATGGGTCTGTTACGGAAGATATTCTTACGGGATTTAAGATGCATGCCCGTGGTTGGAGGTCAATATACTGCATGCCGAAGCGCCCAGCATTCAAAGGTTCTGCTCCTATCAATCTTTCAGACCGTCTGAATCAAGTGCTTCGGTGGGCCCTGGGTTCCGTGGAGATTCTTTTTAGTCGGCACTGCCCCATCTGGTACGGTTATTCTGGAAGGCTCAAGTGGCTCGAGAGGTTTGCATATGTGAACACGACAATCTATCCGATCACCGCTATTCCCCTTGTCATGTACTGTACCTTGCCTGCTGTCTGTCTTCTCACAAACAGGTTCATCATTCCCCAGATTAGTAACATTGCAAGCATATGGTTTATATCACTCTTCATTTCCATCTTTGCGACCGGTATCCTTGAGATGAGGTGGAGTGGGGTCGGAATTGATGAGTGGTGGAGAAATGAACAATTTTGGGTCATAGGTGGCGTTTCAGCTCATCTTTTTGCTGTCGTCCAAGGTTTACTCAAAGTGCTTGCTGGAATCGATACCAACTTTACGGTTACCTCCAAGGCGTCTGACGAAGATGGAGACTTTGCGGAATTATACATGTTCAAATGGACAACCCTTCTCATTCCACCCACAACACTGCTAATCATAAACATGGTGGGTGTTGTTGCTGGGATCTCGTATGCCATCAATAGTGGCTACCAGTCATGGGGTCCGCTATTCGGCAAGCTTTTCTTCGCATTTTGGGTGATTATCCATCTCTATCCTTTCCTCAAAGGTCTCATGGGCCGCCAAAACCGAACACCAACCATTGTGGTTGTCTGGTCCATTCTGCTCGCTTCCATCTTCTCACTGTTATGGGTCCGAGTCGACCCATTTATAACACGAGTCAGGGGTCCTGACACCGAGCAGTGTGGAATAAACTGCTAG 3228 0.4483 MESEGEAGTKPKTALGAQVCQICGDSVGKTVDGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDGEEDGVADDGTSDLNYDSENQNQKQKISERMLSWHMTYGRTEEIGAPNYDKEVSHNHIPLLTSGQEVSGELSAASPERLSMASPGGPGGKRVHSLPYSSDINQSPNIRAVDPGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIILRLIILCFFLHYRITNPVRNAYPLWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETAEFARKWVPFCKKYNIEPRAPEWYFTQKIDYLKDKIQTSFVKDRRAMKREYEEFKVRVNALVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSLCGGSRKKSSKSSKKGSDKKKSSKHVDPTIPIYNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPDTLLKEAIHVISCGYEDKSDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYSGRLKWLERFAYVNTTIYPITAIPLVMYCTLPAVCLLTNRFIIPQISNIASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINMVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFITRVRGPDTEQCGINC 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02515 1075 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Accr1g02515 1075 SUPERFAMILY Nucleotide-diphospho-sugar transferases 361 874 IPR029044 -
Accr1g02515 1075 Pfam Cellulose synthase 347 1068 IPR005150 GO:0016020|GO:0016760|GO:0030244
Accr1g02515 1075 SUPERFAMILY RING/U-box 5 88 - -
Accr1g02515 1075 Pfam Zinc-binding RING-finger 10 86 IPR027934 -
Accr1g02515 1075 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 457 638 IPR029044 -
Accr1g02515 1075 Coils Coil 445 465 - -
Accr1g02515 1075 FunFam Cellulose synthase 3 94 - -
Accr1g02515 1075 CDD mRING-HC-C4C4_CesA 18 68 - -
Accr1g02515 1075 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 250 1042 - -
Accr1g02515 1075 MobiDBLite consensus disorder prediction 644 679 - -
Accr1g02515 1075 MobiDBLite consensus disorder prediction 73 107 - -
Accr1g02515 1075 FunFam Cellulose synthase 464 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02515 Accr-Chr1 61193679 61200413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02515 1 1075 Glycosyltransferase AT5G05170 86.710 0.0 1935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02515 K10999 - gmx:100783162 2014.96