Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02463 ATGGGCAGAGAAACTTGGTGGGCCATTTTCCTTCTCTCATTCCTTCTCTTCGTGGATGAAATCCATGGAAGCAGAAGGCAAGAACAAGCCCTGAGGAATCTGAACAAGGCCAAGTTCTGGGGAGGTTCCGTTGACAGAAGCAGTGAAACAATCTTGGAGGTTGATAATAAGGCTGTGTTTGGTGACCATGATTATGATAAGTCTCGTTACTATTATGCTCAACAAGGATTAAAAGAGAAAGATAGGATTCAGAAACTTCCAGGGCAACCTGAAGGTGTGAGTTTTTCTCAGTATGGAGGATATATTACCGTAGATAAAAGTGCAGGAAGAGCTTTCTATTATTACTTTGTTGAAGCTCAACAATCTCGTCATACCCACAAATTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCAGGATGCTCGTCACTTGCGTATGGGGCAATGCAAGAGCTGGGACCATTCCGAGTAAACAGTGATGGCAAAACACTTCAAACCAACAAATACTCTTGGAATCATGCTGCAAATGTATTGTTTTTAGAATCACCAGCCGGAGTAGGATTTTCATATTCAAACAAGTCATCGGATTATGACAATAATGGTGACAGGAAAACAGCTTCAGACAATTATGTGTTTTTGAGGAATTGGCTGGAAAGGTTTGCAGAGTATAAAGATTCAGAATTGTACATAGCAGGGGAAAGCTATGCGGGACACTATGTTCCTCAGCTTGCTCACACCATTCTCCACCAAAACAACCACCCCAATTCCTCCTTCTACATCAACCTTAAAGGCATCTTGATAGGGAATGCAGTGATAAATGACAACACAGACAACAAAGGGATGTGGGATTTCTTGGCAAGCCATGCCATAATATCAGACCAAGCAGCTCGTGCTGTGAACAAATTGTGTGATTTATCAGAGTCTGTCTCCAACCAGACCAGTGAATGCCAAGCAGCTTTTGCTGAAATTCAGGATGATATTCAAGACATTAATATTTACAACATTTATGCTCCTCAGTGCCAAAATGCCAACATCACTTTCCTCCCTAAGCCTCCCTCTGCAGTGACAGACCCGTGTAGTGATTATTATGTATATGCATATTTGAACCGAGGTGATGTACAAGAGGCACTGCATGCCAATGTGACAAAACTCACACATGACTGGGAGCCTTGCAGTGATGTTATAACTCATTGGGTTGATAGTGCTTCCACTGTGCTTCCCCTCTTACATGAGTTCCTCAATCACAGCCTTCAAGTTTGGATCTTTAGTGGAGATATTGATGGGAGGGTGCCTGTAACTTCAACCAAGTATTCTATTGAGAGGATGAATCTTCCTGTTAAGACTGCTTGGCATCCCTGGTTCGTCAATGGAGAGGTGGGAGGGTACACAGAGGTTTACAAAGGAGGCTTAACATTTGCTACAGTGAGAGAAGCAGGGCACCAAGTGCCAAGCTATCAGCCAGCAAGAGCCCTGTCTTTGGCTAGCCACTTCCTACGTGGCATCCCTCTTCCTAATTCCACACATACCCCTCATTTCTAG 1536 0.4362 MGRETWWAIFLLSFLLFVDEIHGSRRQEQALRNLNKAKFWGGSVDRSSETILEVDNKAVFGDHDYDKSRYYYAQQGLKEKDRIQKLPGQPEGVSFSQYGGYITVDKSAGRAFYYYFVEAQQSRHTHKLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLQTNKYSWNHAANVLFLESPAGVGFSYSNKSSDYDNNGDRKTASDNYVFLRNWLERFAEYKDSELYIAGESYAGHYVPQLAHTILHQNNHPNSSFYINLKGILIGNAVINDNTDNKGMWDFLASHAIISDQAARAVNKLCDLSESVSNQTSECQAAFAEIQDDIQDINIYNIYAPQCQNANITFLPKPPSAVTDPCSDYYVYAYLNRGDVQEALHANVTKLTHDWEPCSDVITHWVDSASTVLPLLHEFLNHSLQVWIFSGDIDGRVPVTSTKYSIERMNLPVKTAWHPWFVNGEVGGYTEVYKGGLTFATVREAGHQVPSYQPARALSLASHFLRGIPLPNSTHTPHF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02463 511 FunFam Carboxypeptidase 77 341 - -
Accr1g02463 511 Gene3D - 358 395 - -
Accr1g02463 511 Gene3D - 404 499 - -
Accr1g02463 511 ProSitePatterns Serine carboxypeptidases, serine active site. 229 236 IPR018202 GO:0004185
Accr1g02463 511 Pfam Serine carboxypeptidase 87 498 IPR001563 GO:0004185|GO:0006508
Accr1g02463 511 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 82 486 IPR001563 GO:0004185|GO:0006508
Accr1g02463 511 Gene3D alpha/beta hydrolase 77 341 IPR029058 -
Accr1g02463 511 FunFam Carboxypeptidase 404 499 - -
Accr1g02463 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 469 482 IPR001563 GO:0004185|GO:0006508
Accr1g02463 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 189 IPR001563 GO:0004185|GO:0006508
Accr1g02463 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 215 240 IPR001563 GO:0004185|GO:0006508
Accr1g02463 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 178 IPR001563 GO:0004185|GO:0006508
Accr1g02463 511 SUPERFAMILY alpha/beta-Hydrolases 83 503 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02463 Accr-Chr1 60529158 60535696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02463 366 502 Calmodulin-binding Proteins AT2G22960 30.714 9.89e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02463 K16297 - pcin:129316698 815.068