Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02462 ATGGCAATGGGCACACAAACTTGGTGGCTCTTTTTCCTTCTCTTAAACCTTCTCTTTGTGGATAAAATCCATGGAAGCAGAAAGCAAGACCAAGCTGTCAGGAATCTGAACAGAGCCAAGTTCTGGGGAGGCTCCATTGACAGAAGCAGTGAAACAATCTTGGAGGTTGATGATAAGGCTGTGTTTGGCGACCATGATGGTGATAAGTCTCGTTACTATTATGCTCAACAAGGTTTGAAAGAGAAAGATAGGATTGAGAGGCTTCCAGGGCAGCCTGAAGGTGTGAGTTTCTCTCAGTATGGAGGATATGTCACTGTAGATAAAACTGCAGGACGAGCTTTGTATTATTACTTTGTCGAAGCTCAACAATCTCATCATACCCACAAATTGCCTCTTCTTCTCTGGCTCAATGGAGGTCCAGGATGCTCATCTCTAGGGTATGGAGCAATGCAAGAGCTGGGACCATTCCGAGTAAACAGTGATGGCAAAACACTTCAAACCAACAAATACTCTTGGAATCATGCTGCCAATGTATTGTTTTTGGAATCACCAGCAGGAGTGGGATTTTCATACTCAAACAAGACATCAGATTATGACAAAAATGGTGACAGAAAGACTGCTACAGACAACTATGTGTTTCTGAGGAACTGGTTGGGGAGATTTGCAGAGTATAAGACTTACGATTTGTACATAGCAGGGGAGAGTTATGCAGGGCATTATGTTCCTCAGCTTGCTCACACCATTCTCCATCATAACAACCATCCCAACTCCACCTTCTTCATCAACCTCAAGGGAATCTTGATAGGGAATGCGGTGATAAATGATGACACAGACAACAGAGGAAGATGGGAATTCCTAGCGAGCCATGCCATAATATCAGACAAGGCAGCGCATGCCGTAGCCAAATTGTGTGTTTCTTTCTCATCATCATCAAGAGATGATCAAAACATTGATAATGAGTGTAGAAAAGCAGCAGATGAAATAGAGGCAGACACAGAGTCTATCAATATCTACAACATCTATGCTCCTCAATGCCAGGATTCTAACCTCACTTCCATTCCTAAGCCCCCTTCTAAAGTGGCAGACCCGTGTATTGATTATTATGTGGATGCATACATGAACCGGGTTGAGGTGCAAGAGGCACTACATGCCAATGTCACAAAATTGAGTCACGAATGGGGACTTTGCAGCAATGTCATTACCAAGTGGGTTGATAGCTCTTCCACTGTTCTTCCTCTTCTCTCTGAGTTCCTCAACCGCAGCCTCCGCGTTTGGATTTTCAGTGGTGACATTGATGGAATGGTGCCGGTTACTTCAACAAAGTATTCCATTGACAAGTTAAATCTCACTCATGAGGCTACGTGGAGCCCTTGGTTCGTCAATGGAGAGGTAGGAGGGTACTCAGAGATTTACAAAGAAGGATTAACGTTTGCAACAGTGAGAGGAGCAGGGCATGAAGTGCCAAGCTACCAGCCAGCAAGAGCTCTTGCTTTGGTCACTCACTTCTTAAAAGGCGTCCCTCTTCCTAATACCACAACATCCGCACACACCTGA 1554 0.4447 MAMGTQTWWLFFLLLNLLFVDKIHGSRKQDQAVRNLNRAKFWGGSIDRSSETILEVDDKAVFGDHDGDKSRYYYAQQGLKEKDRIERLPGQPEGVSFSQYGGYVTVDKTAGRALYYYFVEAQQSHHTHKLPLLLWLNGGPGCSSLGYGAMQELGPFRVNSDGKTLQTNKYSWNHAANVLFLESPAGVGFSYSNKTSDYDKNGDRKTATDNYVFLRNWLGRFAEYKTYDLYIAGESYAGHYVPQLAHTILHHNNHPNSTFFINLKGILIGNAVINDDTDNRGRWEFLASHAIISDKAAHAVAKLCVSFSSSSRDDQNIDNECRKAADEIEADTESINIYNIYAPQCQDSNLTSIPKPPSKVADPCIDYYVDAYMNRVEVQEALHANVTKLSHEWGLCSNVITKWVDSSSTVLPLLSEFLNRSLRVWIFSGDIDGMVPVTSTKYSIDKLNLTHEATWSPWFVNGEVGGYSEIYKEGLTFATVRGAGHEVPSYQPARALALVTHFLKGVPLPNTTTSAHT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02462 517 Gene3D - 364 401 - -
Accr1g02462 517 Gene3D alpha/beta hydrolase 79 347 IPR029058 -
Accr1g02462 517 Pfam Serine carboxypeptidase 89 505 IPR001563 GO:0004185|GO:0006508
Accr1g02462 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Accr1g02462 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Accr1g02462 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 475 488 IPR001563 GO:0004185|GO:0006508
Accr1g02462 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Accr1g02462 517 SUPERFAMILY alpha/beta-Hydrolases 81 509 IPR029058 -
Accr1g02462 517 ProSitePatterns Serine carboxypeptidases, serine active site. 231 238 IPR018202 GO:0004185
Accr1g02462 517 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 84 492 IPR001563 GO:0004185|GO:0006508
Accr1g02462 517 FunFam Carboxypeptidase 78 355 - -
Accr1g02462 517 FunFam Carboxypeptidase 362 508 - -
Accr1g02462 517 ProSitePatterns Serine carboxypeptidases, histidine active site. 475 492 IPR033124 GO:0004185
Accr1g02462 517 FunFam Carboxypeptidase 410 505 - -
Accr1g02462 517 Gene3D - 410 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02462 Accr-Chr1 60509160 60511660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02462 372 508 Calmodulin-binding Proteins AT2G22960 30.657 5.84e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02462 K16297 - pcin:129316698 816.994