Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02461 ATGGCCAGAGAAACTTGGTGGGCCCTTTTCCTTTTCTCGTCCCTTCTCTTTATGGATGAAATCCATGGAAGCAGAGGGCAAGAACAAGCCCTGAGGAATCTGAACAAGGCCAAGTTCTGGGGAGTTTCTGTTGACAAAAGCAGTGAAACAATCTCGGAGGTTGATAATAAGGCTATGTTTGGCGACCATGATTATGATAAGTCTCCTTACTATTATGCTCAACAAGGTTTGAAAGAGGAAGATAGGATTGAGAGACTTCCAGGGCAGCCTGAAGGTGTGAGTTTATCTCAGTATGGAGGATATGTCACTGTTGATAAAGTTGCAGGACGAGCTTTCTATTATTACTTTGTTGAAGCTCAACAATCTCATTGTAGCCACAAATTGCCTCTTCTTCTCTGGCTCAATGGAGGTCCAGGTTGTTCATCTCTAGGATATGGAGCAATGGAAGAAATTGGACCCTTCCGAGTTAACAGTGACGGCAAAACCCTTCACGCTAACAAATACTCCTGGAACTATGCTGCAAATGTATTGTTCTTAGAATCACCAGTTGGAGTGGGATTTTCATACTCAAACAAGACATCAGATTACAATGGTAATGGAGACAGAAAAACTGCTTCAGACAATTATGTGTTTTTGAGGAATTGGTTGGAGAGATTTCCTGAGTACAAGACTTCAGATTTCTACATAGCTGGTGAGAGCTATTCTGGTCACTATGTTCCTCAACTTGCTCACACCATTCTCCACCATAACAACCACCCTAACTCTACCTTCTTCATCAACCTCAAAGGCATCCTGATAGGGAACGCAGTGCTAAATGGTGAGACAGACAACAGAGGAAGTTGGGATTACTTGGCAAGCCATGCCATAATATCAGACAAAGCAGCGCATGATATCAACAATTATTGCAACTTCTCAGATGTTGCCACTCTTGAGAGCAAAGAGTGCCAAGAAGCATTTGAAGAAATAGGCTTCGATACTGACTTCATCAATATATACAACATCTATGCTCCTCTATGCCTTGATTCCAACCTCACTTCCCTCCCTAAACTCTACTCTGAAGTGATAGATCCATGCAGTGATTATTATCTGTATGCATACATGAACCGAGCAGAGGTACAAGAGGCATTACATGCCAATGTCACGAAACTCACACATGACTGGCAACTTTGTAGAAGTCTTAGCAACTGGACTGATTCCCCTTCCACCATACTTCCCCTCTTAAAAGAGTTCCTCAATCACGACCTTCGTCTTTGGATTTACAGTGGTGACGTTGATGGATTAGTGCCAGTAACAGCAACCAAGTATTCCATTGAGAAGTTGAATCTCACTGTTAAGACTGTTTGGCATCCTTGGTTCGTAAACGGGGAGGTAGGAGGGTACTCGGAGATTTACAAAGAAGGATTAACGTTTGCAACAGTGAGAGGAGCAGGGCATGAAGTGCCAAGCTACCAGCCAGCAAGAGCCCTTACTTTGGTCACTTACTTCTTAAAAGGCGTCCCTCTTCCTAACACCACCACCACAGCATTTTGA 1530 0.4327 MARETWWALFLFSSLLFMDEIHGSRGQEQALRNLNKAKFWGVSVDKSSETISEVDNKAMFGDHDYDKSPYYYAQQGLKEEDRIERLPGQPEGVSLSQYGGYVTVDKVAGRAFYYYFVEAQQSHCSHKLPLLLWLNGGPGCSSLGYGAMEEIGPFRVNSDGKTLHANKYSWNYAANVLFLESPVGVGFSYSNKTSDYNGNGDRKTASDNYVFLRNWLERFPEYKTSDFYIAGESYSGHYVPQLAHTILHHNNHPNSTFFINLKGILIGNAVLNGETDNRGSWDYLASHAIISDKAAHDINNYCNFSDVATLESKECQEAFEEIGFDTDFINIYNIYAPLCLDSNLTSLPKLYSEVIDPCSDYYLYAYMNRAEVQEALHANVTKLTHDWQLCRSLSNWTDSPSTILPLLKEFLNHDLRLWIYSGDVDGLVPVTATKYSIEKLNLTVKTVWHPWFVNGEVGGYSEIYKEGLTFATVRGAGHEVPSYQPARALTLVTYFLKGVPLPNTTTTAF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02461 509 SUPERFAMILY alpha/beta-Hydrolases 80 502 IPR029058 -
Accr1g02461 509 FunFam Carboxypeptidase 356 501 - -
Accr1g02461 509 FunFam Carboxypeptidase 403 498 - -
Accr1g02461 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 468 481 IPR001563 GO:0004185|GO:0006508
Accr1g02461 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 215 240 IPR001563 GO:0004185|GO:0006508
Accr1g02461 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 178 IPR001563 GO:0004185|GO:0006508
Accr1g02461 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 189 IPR001563 GO:0004185|GO:0006508
Accr1g02461 509 Gene3D - 403 498 - -
Accr1g02461 509 Gene3D - 358 393 - -
Accr1g02461 509 Gene3D alpha/beta hydrolase 75 349 IPR029058 -
Accr1g02461 509 FunFam Carboxypeptidase 77 341 - -
Accr1g02461 509 ProSitePatterns Serine carboxypeptidases, histidine active site. 468 485 IPR033124 GO:0004185
Accr1g02461 509 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 82 485 IPR001563 GO:0004185|GO:0006508
Accr1g02461 509 Pfam Serine carboxypeptidase 87 498 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02461 Accr-Chr1 60496135 60499969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02461 366 501 Calmodulin-binding Proteins AT2G22960 31.618 2.23e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02461 K16297 - pcin:129316698 781.556