Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02460 ATGGCAATGGGCAGAGAAACTTGGTGGGCCCTTTTCCTTCTCTTGTTCCTTGTCTCTGTGGATGAAATCCATGGAAGCAGAAGGCAAGGACAAGCCCTAAGGAATCTAAACAAGGCCAAGTTTTGGGGAGTTTCCGTTGACAAAAGCAGTGAAACAATCTCGGAGGTTGATAATATGGCTGTGTTTGGCGACCATGATTATGATAAGTCTCCTTACTATTATGCTCAACAAGGTTTGAAAGAGGAAGATAGGATTGAGAGACTTCCAGGGCAGCCTGAAGGTGTGAGTTTATCTCAGTATGGAGGATATGTCACTGTAGATAAAGTTGCAGGACGAGCTTTCTATTATTACTTTGTTGAAGCTCAACAATCTCATTATAGCCACAAATTGCCTCTTCTTCTCTGGCTCAATGGAGGTCCAGGTTGTTCATCTCTAGCATATGGAGCAATGGAAGAAATTGGACCCTTCCGAGTTAACAGTGACGGCAAAACACTTCACGCCAACAAATACTCTTGGAACTATGCTGCAAATGTATTGTTCTTAGAATCACCAGTTGGAGTGGGATTTTCATACTCAAACAAGACATCAGATTACAACAGTAATGGGGACAGAAAAACTGCTTCAGACAATTATGTGTTTTTGAGGAACTGGTTGGAGAGATTTTCTGAGTACAAGACTTCAGATTTCTACATAGCTGGTGAGAGCTATTCTGGTCACTATGTTCCTCAACTTGCTCACACCATTCTCCACCATAACAACCAACCTAACTCCACCTTCTTCATCAACCTCAAAGGCATCCTGATAGGGAACGCAGTGATAAATGATGAGGCAGACAATAGAGGAAGTTGGGACTACTTGGCAAGCCATGCCATAATATCAGACAAAGCAGCGCATGATATCAACAAATATTGCAACTTCTCAGATGTTGCATCTTTTAATAAGAGCAAAGAGTACTGCCAAGAAGCATTTGAAGAAACAGGCAATGATACTGCCTCTATCGATATGTACAACATCTATGCTCCTCGATGCCTTGAATCCAACCTCACTTCCTTCCCTAAACCCTACTCTGAAGTGATAGATCCATGCAGTGATAATTATGTGTATGGATACATGAACCGAGCAGAGGCACAAGAGGCATTACATGCCAATGTCACAAAACTCACACATGACTGGCAACTTTGTAGAAGTATGAGCAACTGGACTGATGCCCCTTCCACCATACTTCCCCTCTTACAAGAGTTCCTCAATCACGGCCTTCGTCTTTGGCTTTACAGTGGTGACGTTGATGGAGTGGTGCCAGTAACAGCAACCAAGTATTCCATTGAGAAGTTGAATCTCACTGTTAAGACTGCTTGGCATCCTTGGTTCGTAAACGGGGAGGTAGGAGGGTACTCAGAGATTTACAAAGAAGGATTAACGTTTGCAACAGTGAGAGGAGCAGGGCATGAAGTGCCAAGCTACCAGCCAGCAAGAGCTCTTGCTTTGGTCACTTGCTTCTTAAAAGGAATCCCTCTTCCTAATACCACCACCACAGCATTTTGA 1542 0.4339 MAMGRETWWALFLLLFLVSVDEIHGSRRQGQALRNLNKAKFWGVSVDKSSETISEVDNMAVFGDHDYDKSPYYYAQQGLKEEDRIERLPGQPEGVSLSQYGGYVTVDKVAGRAFYYYFVEAQQSHYSHKLPLLLWLNGGPGCSSLAYGAMEEIGPFRVNSDGKTLHANKYSWNYAANVLFLESPVGVGFSYSNKTSDYNSNGDRKTASDNYVFLRNWLERFSEYKTSDFYIAGESYSGHYVPQLAHTILHHNNQPNSTFFINLKGILIGNAVINDEADNRGSWDYLASHAIISDKAAHDINKYCNFSDVASFNKSKEYCQEAFEETGNDTASIDMYNIYAPRCLESNLTSFPKPYSEVIDPCSDNYVYGYMNRAEAQEALHANVTKLTHDWQLCRSMSNWTDAPSTILPLLQEFLNHGLRLWLYSGDVDGVVPVTATKYSIEKLNLTVKTAWHPWFVNGEVGGYSEIYKEGLTFATVRGAGHEVPSYQPARALALVTCFLKGIPLPNTTTTAF 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02460 513 SUPERFAMILY alpha/beta-Hydrolases 77 510 IPR029058 -
Accr1g02460 513 Gene3D alpha/beta hydrolase 77 352 IPR029058 -
Accr1g02460 513 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 84 489 IPR001563 GO:0004185|GO:0006508
Accr1g02460 513 FunFam Carboxypeptidase 407 502 - -
Accr1g02460 513 Gene3D - 407 502 - -
Accr1g02460 513 FunFam Carboxypeptidase 79 345 - -
Accr1g02460 513 ProSitePatterns Serine carboxypeptidases, histidine active site. 472 489 IPR033124 GO:0004185
Accr1g02460 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 472 485 IPR001563 GO:0004185|GO:0006508
Accr1g02460 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Accr1g02460 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Accr1g02460 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Accr1g02460 513 Pfam Serine carboxypeptidase 89 502 IPR001563 GO:0004185|GO:0006508
Accr1g02460 513 FunFam Carboxypeptidase 360 505 - -
Accr1g02460 513 Gene3D - 362 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02460 Accr-Chr1 60471507 60475099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02460 370 505 Calmodulin-binding Proteins AT2G22960 30.882 1.77e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02460 K16297 - pcin:129316698 779.63