Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02459 ATGGCAATGGGCAGAGAAACTTGGTGGGCCCTTTTCCTTCTCTTATTCCTTGCCTCTGTGGATGAAATCCATGGAAGCAGAAGGCAAGGACAAGCCCTGAGGAATCTGAACAAGGCCAAGTTCTGGGGACGTTCCGTTGACAGAAGCAGTGAAACAATCTCGGAGGTTGATAATAAGGATATGTTTGGCGTCCATGATTATGATAAGTCTCCTTACTATTATGCTCAACAAGGTTTGAAAGAGGAAGATAGGATTGAGAGACTTCCAGGGCAGCCTGAAGGTGTGAGTTTATCTCAGTATGGAGGATATGTTACTGTAGATAAAGTTGCAGGACGAGCTTTCTATTATTACTTTGTTGAAGCTCAACAATCTCATTACAGCCACAAATTGCCTCTTCTTCTCTGGCTCAATGGAGGTCCAGGTTGTTCATCTCTAGCATATGGAGCAATGGAAGAAGTTGGACCCTTCCGAGTTAACAGTGACGGCAAAACACTCCACGCCAACAAATACTCTTGGAACTATGCTGCAAATGTATTGTTCTTAGAATCACCAGCTGGAGTGGGATTTTCATACTCAAACAAGACATCCGATTACAACAGTAATGGGGACAGAAAAACTGCTTCAGACAATTATGTGTTTTTGAGGAACTGGTTCGAGAGATTTCCTGAATACAAGACTTCAGATTTCTACATAGCTGGTGAGAGCTATTCTGGTCACTATATTCCTCAACTTTCTCACACCATTCTCCACCATAACAACCACCCTAACTCCACCTTCTTCATCAACCTCAAAGGCATCCTGATAGGGAACGCAGTGATAAATGTTGAGACAGACAATAGAGGAACTTGGGACTACTTGGCAAGCCATGCCATAATATCAGACAAAGCAGCGCATGATCTCACCAGATATTGCAACTTCTCAGATGTTGCCATTCTTAAGAGCAAAGAGTGCCAAGAAGCATTTGAAGAAATGGGCAACGATACTGCCTTCATTAATTTGTACAACATCTATGCTCCTCTATGTCATGATTCCAACCTCACTTCCCTCCCTAAACCCTACTCTGAAGTGATAGATCCATGCAGTGATAATTATGTGTATGCATACATGAACCGAGCAGAGGCACAAGAGGCATTACATGCCAATGTCACGAAACTCACACATGACTGGAAACTTTGTACAAGAAGCAACTGGACTGATGCCCCTTTCACCATACTTCCCCTCTTACAAGAGTTCCTCAATCATGGCCTTCGTCTTTGGATTTACAGTGGTGACATTGATGGAAAGGTGCCAGTAACAGCAACTAAGTATTCCATTGAGAAGTTGAATCTCACTGTTAAGACTATTTGGCATCCTTGGTTCGTAAACGGGGAGGTAGGAGGGTACTCGGAGATCTACAAAGAAGGATTAACGTTTGCAACAGTGAGAGGAGCAGGGCATGAAGTGCCCAGCTACCAGCCAGCAAGAGCTCTTGTTTTGGTCACTCACTTCTTAAAAGGAATCCCTCTTCCTAATACCACCACCACAACATTTTGA 1533 0.4351 MAMGRETWWALFLLLFLASVDEIHGSRRQGQALRNLNKAKFWGRSVDRSSETISEVDNKDMFGVHDYDKSPYYYAQQGLKEEDRIERLPGQPEGVSLSQYGGYVTVDKVAGRAFYYYFVEAQQSHYSHKLPLLLWLNGGPGCSSLAYGAMEEVGPFRVNSDGKTLHANKYSWNYAANVLFLESPAGVGFSYSNKTSDYNSNGDRKTASDNYVFLRNWFERFPEYKTSDFYIAGESYSGHYIPQLSHTILHHNNHPNSTFFINLKGILIGNAVINVETDNRGTWDYLASHAIISDKAAHDLTRYCNFSDVAILKSKECQEAFEEMGNDTAFINLYNIYAPLCHDSNLTSLPKPYSEVIDPCSDNYVYAYMNRAEAQEALHANVTKLTHDWKLCTRSNWTDAPFTILPLLQEFLNHGLRLWIYSGDIDGKVPVTATKYSIEKLNLTVKTIWHPWFVNGEVGGYSEIYKEGLTFATVRGAGHEVPSYQPARALVLVTHFLKGIPLPNTTTTTF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02459 510 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 84 486 IPR001563 GO:0004185|GO:0006508
Accr1g02459 510 FunFam Carboxypeptidase 404 499 - -
Accr1g02459 510 Gene3D alpha/beta hydrolase 77 350 IPR029058 -
Accr1g02459 510 Gene3D - 360 395 - -
Accr1g02459 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 469 482 IPR001563 GO:0004185|GO:0006508
Accr1g02459 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Accr1g02459 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Accr1g02459 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Accr1g02459 510 FunFam Carboxypeptidase 358 502 - -
Accr1g02459 510 Pfam Serine carboxypeptidase 89 499 IPR001563 GO:0004185|GO:0006508
Accr1g02459 510 FunFam Carboxypeptidase 79 343 - -
Accr1g02459 510 SUPERFAMILY alpha/beta-Hydrolases 82 503 IPR029058 -
Accr1g02459 510 ProSitePatterns Serine carboxypeptidases, histidine active site. 469 486 IPR033124 GO:0004185
Accr1g02459 510 Gene3D - 404 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02459 Accr-Chr1 60463418 60467007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02459 368 502 Calmodulin-binding Proteins AT2G22960 30.882 1.45e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02459 K16297 - pcin:129316698 767.689