Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02452 ATGGGTTACTTCTCTTGCAGAGCTGAATCTGCCGTTTCTACCTCCAATTCTGTATCCCCATCTTCCTCCTCTAAACCCTCCTCTGCTCAGAAACCTGACAAACCCATCAAGATCCAACACTTCGACTACAATGACCTCGAAGCCGCCACTAATGGCTTCTCTGATAGAAAACTCCTAGGCAAAGGCAGCCATGGCTATGTCTACAAAGCCGTTGTTCGAGGACGTCCCGTCGCCGTCAAGAGGCCATCGAGAGCTCACGGTGCTGTTCTTCGACGACCCAGTTTGCTGTCTTCTTCGTCGGCGCCGGAGATTACCAACGAGGTGGACAATGAGATCGACATCTTGTCGAAAATTCAGAGCCCGAGATTGGTCAATTTGGTGGGTTTCACAAACGATTCGAAAGATAGACTTCTGGTTGTGGAGTTCATGAGCAATGGAACCCTCTACGATGTTCTTCATTCTTCTGCACGACCACCCAATTGGGGTCGGAGAATCCGATTGGCTCTGCAAACTGCAAAGGCCATCGATACCCTTCATTCCTCGACCCCACCTGTAATTCACCGAGACATCAAATCTGCGAATGTTTTAATAGATCGAAACTTCAATGCTCGATTGGGAGATTTTGGGTTAGCCCTGCGAGGCCATGAAGATGATTATAGACTCAGGTCTACTCCTCCAGCAGGTACTATGGGGTATCTTGATCCTTGTTATGTGACTCCAGATAACTTGAGTACAAAAACAGATGTGTTTAGTTTTGGGATTTTGCTGTTAGAGATAATTAGTGGTAGAAAAGCGATTGATATTTCATATTCACCACCTTCCATTGTGGATTGGGCCATTCCTCTCATTAAGAAAGGAAAGTTATTGGCTGTTTATGATCCCAGGATATCACCTCCTAAGGATCCAGTTGTTAGGAAGCAATTGGCTGTGATTGCTGCAAAATGTGTAAGGTCTTGCAGGGAAAGAAGGCCTTCAATGAAGGAGATAGTTGCTTGGCTTACCGGGTTATGTAAACTGGTGCCTCTTCATTCTTGGAATGGTTTTAACAATCCCTGTATGATGATTGAGACTGTGGGACGCCCAATTGAAGCTAGAAATGCCCATATGAGTCCAAGACCAGAGGAAGGTTTTGAAGGTGGAAATTTTGAAACTTTAGATGCTAGATTGTCTAAATCTGCAAATAGATATTCAAGGAGAGTGTACTCCGATCTGGGGTTCAGAAGCAACTTGATGGAACTTATGACTAACCCTGAGGAACCAGATAAATCTGGTTACAGAGTTTCCAGTTCAAGGTTTGGTAGTGGGAGATATTTCACAAGAAGCTTAAATCTCTACAGGGCATGTGGTACAGATAAAGATGCTTTTGGTTTGAGTGAAGGCCAAATTGTTGGGGATGGGAGCTCAAATTTGTGTCCAAAACAAGAAGGTAATTCTGGATCAGATTTGAATTCTCAGGAAGCTGAAGCTAATTCCTAG 1476 0.4444 MGYFSCRAESAVSTSNSVSPSSSSKPSSAQKPDKPIKIQHFDYNDLEAATNGFSDRKLLGKGSHGYVYKAVVRGRPVAVKRPSRAHGAVLRRPSLLSSSSAPEITNEVDNEIDILSKIQSPRLVNLVGFTNDSKDRLLVVEFMSNGTLYDVLHSSARPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALRGHEDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDISYSPPSIVDWAIPLIKKGKLLAVYDPRISPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEIVAWLTGLCKLVPLHSWNGFNNPCMMIETVGRPIEARNAHMSPRPEEGFEGGNFETLDARLSKSANRYSRRVYSDLGFRSNLMELMTNPEEPDKSGYRVSSSRFGSGRYFTRSLNLYRACGTDKDAFGLSEGQIVGDGSSNLCPKQEGNSGSDLNSQEAEANS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02452 491 Pfam Protein tyrosine and serine/threonine kinase 57 331 IPR001245 GO:0004672|GO:0006468
Accr1g02452 491 PANTHER OS01G0253100 PROTEIN 21 336 - -
Accr1g02452 491 Gene3D Transferase(Phosphotransferase) domain 1 143 341 - -
Accr1g02452 491 Gene3D Phosphorylase Kinase; domain 1 24 142 - -
Accr1g02452 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Accr1g02452 491 MobiDBLite consensus disorder prediction 8 30 - -
Accr1g02452 491 ProSitePatterns Protein kinases ATP-binding region signature. 59 80 IPR017441 GO:0005524
Accr1g02452 491 ProSiteProfiles Protein kinase domain profile. 53 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02452 491 SUPERFAMILY Protein kinase-like (PK-like) 30 333 IPR011009 -
Accr1g02452 491 FunFam Serine/threonine-protein kinase-like protein 143 346 - -
Accr1g02452 491 MobiDBLite consensus disorder prediction 1 34 - -
Accr1g02452 491 FunFam Serine/threonine-protein kinase-like protein At1g28390 22 142 - -
Accr1g02452 491 SMART serkin_6 53 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02452 491 MobiDBLite consensus disorder prediction 464 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02452 Accr-Chr1 60321388 60322863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02452 41 333 Receptor kinase-like Gene Family AT3G59420 43.813 1.02e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Accr1g02452 PK_Tyr_Ser-Thr 7.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02452 - - vum:124832395 740.339