Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02446 ATGGAGCGGTACCTCAGAGATAACTTCGATGTCTCACACAAGCGGCCCTCTGAGGCCGCCCTCCTCCGCTGGAGATCTGCCGTTGCCATCGTCAAGAATCCTCGTCGCCGATTTCGTATGGTCGCTGACCTTGCCAAGCGTGCCGAGGGTGAGAAGAAGCGCAAGAATCTCCAGGAAAAAGTACGAGTTGCTCTCTATGTGCAAAAAGCAGCATTGCAGTTTATCGACGCTGGGCAGCTTGGTTCATCCATACTCTCCAAAGAAATCAACGAGTCAGGTTTTGCTATTGAGCCCGACGATTTAGCATCCATAAGCAGAACGCATGATAGCAAGGGCTTAGAACTTAACGGAGGAATAGCAGGATTTGCAAAAGCAGTTAATGTATCATTAAAAGACGGTGTTCATTCAAGTGATGTTGCTCATAGACAAAATATCTTCGGTTCTAACCGCTTCGCCGAGAAGCCCTCAAGAGGATTCTGGATGTTCGTTTGGGATGCAATGCAAGATTTGACTCTCATTATCCTTTTGTTATGTGCTCTTGTTTCTATAGGAGTTGGAATCCCAACTGAAGGTTGGCCAAAAGGTGTATATGATGGAGTGGGAATCGCAATCTCTATTCTCTTAGTTGTCTTCGTCACTTCAGTTAGTGACTATAAACAGTCTTTGCAATTCAAAGATTTGGAAAACGAGAAGAAAAATGTCACCATTCAAGTCACTAGAGATGGGAATAGACAAAAGATCTCAGTCTATGAGTTAGTGGTAGGAGATATAGTTCATTTATCAATTGGAGACATAGTTCCTGCAGATGGACTATTCACATCAGGTTATAGCTTATTAATTGATGAATCAAGCTTATCTGGGGAGAGTGAGGCTGTGCACGTCGACCAAAACACTCCTTTCCTTCTAGCTGGGACCAAGGTACAAGATGGATCTGCTAAGATGCTAGTGACTTCTGTTGGTATGAGGACTGAATGGGGAAGATTGATGGACACTCTGAACGAAGGGGGAGATGATGAGACGCCATTGCAGGTCAAATTAAATGGAGTTGCGACCATAATTGGAAAGATTGGGTTGGGTTTTGCCTTAGTCACATTCTTGGTTCTAACTGGCAGGTTTCTGGTGCATAAAATAGTTCTTCATGAAATCACCCAATGGTCCTTACACGACGCATCTGAGCTTCTCAATTTCTTTGCTACTGCTGTGATTATAATTGTTGTGGCAGTTCCAGAGGGGCTTCCTTTGGCAGTGACTTTAAGCCTTGCCTTTGCAATGAAGAAATTAATGAACGACAAGGCACTTGTCAGGCACCTCTCTGCATGCGAGACTATGGGCTCAGCTGGTACTATTTGCACGGACAAAACAGGAACTTTGACAACAAACCACATGGTCGTACAGAAAGTATGGATTTGCGGGCAAACTAAGGAGATTAAAAGCAATAACAGTGAGTTGAAGTCGTCAATTTCTGAGCAAATATTTGACCTCTTTTTGCAGTCTATATTTCAGAATACTAGCTCAGAGGTAGTCAAAGGTGAAAACGGGAAGAATAAGGTTATAGGTACTCCAACAGAGAAGGCATTGCTAGAATTTGGGTTGCTTGCTGGAGGTGATAGTAATGTTTATAATGATAAGTATAAGATATTAACAATCGAACCATTCAATTCGAACAGGAAAAGAATGTCAGTGCTTGTGACTCTTCCTGGTGCTGCCAATAGGTCTAGAGCATTCTGTAAGGGAGCATCAGAAATAGTTCTGGAAATATGTGACAAACTTGTGGATACAAATGGCAAAGTCGTTCGTATCTTCGAAGAACAAAGAAAGAACATAGAAAAAGTTATAGATGTTTTTGCCTCTGAAGCTTTAAGAACTCTCTCAATCGCCTTTAAAGATGTTGAAAATTCCAAAGGGGATAAGATTCCTGAGGAGAATTTTACATTGTTGGCTATTGTTGGGATCAAGGATCCTGTGAGACCTGGAGTAAAAGAAGCTGTAGAAACATGTAAAGCAGCTGGTATATCAGTAAAGATGGTGACTGGTGATAACATCATTACTGCTAAAGCGATAGCTAGAGAATGCGGTATATTGACAGATGGGATTGCCATCGAAGGATCTGAATTTCGCAAGAAGACACAGCAAGAAATGGAGGAGATAATACCAAAAATACAGGTTATGGCTCGATCTTTGCCTTTGGACAAGCACACTTTAGTGACACATTTAAGAAAGGACTTCGAGGAAGTTGTTGCAGTAACTGGTGATGGCACCAACGATGCTCCAGCACTGCGTGAGGCGGATATTGGCCTTGCTATGGGCATAGCAGGAACAGAGGTCGCAAAAGAAAATGCAGATGTCATTGTAATGGATGATAACTTCACAACCATACTGAATGTAATCAGATGGGGCCGTTCGGTCTATGTCAATGTTCAGAAGTTTGTTCAATTCCAATTAACAGTAAATGTTGTGGCTCTCATCCTCAATTTTGTTTCCGCGTGTGTGTCAGGTTCTGCTCCTCTTACCGCTGTTCAAATGCTTTGGGTAAACATGATCATGGACACTCTTGGTGCTTTAGCTCTGGCTACAGAACCTCCCCATGATGGGCTGATGAAAAGACCACCCATTGGAAGGAATGTCAGACTCATAACCGGCATCATGTGGAGGAATATAATTGGCCAGAGCCTCTATCAGCTAGCTGTCCTTTTGGTTCTCAAATTTCGCGGTAGACAGATTTTGAAGCTTAATGGTCCTGATGCAACCTCAGTTCTGAATACTTTCATATTCAACATCTTCGTATTTTGCCAGGTATTCAACGAGATAAACAGCCGTGACATGGAGAAGATCAATGTTTTCCGAGGCATGTTCAGTAGTTGGATCTTCCTTGGAGTTTTGGGCTCAACAATTTGTTTCCAAGCCATACTTGTTGAATTTCTGGGTACTTTTGCTCAAACAGTGCCACTAAACTGGGACCTATGGCTAGCCAGTGTCTTAATTGGTGCAGTGAGCTTACCCTTAGCTGCTATTTTCAAATGCATTCCCCTTCCAACAATGGATGGTTTCGCTGACCTTCACCGTCGTTATCATCATCATCATGATTACGTACCCCTCCGGAGTGGCCCAGAGATGGCATGA 3120 0.4292 MERYLRDNFDVSHKRPSEAALLRWRSAVAIVKNPRRRFRMVADLAKRAEGEKKRKNLQEKVRVALYVQKAALQFIDAGQLGSSILSKEINESGFAIEPDDLASISRTHDSKGLELNGGIAGFAKAVNVSLKDGVHSSDVAHRQNIFGSNRFAEKPSRGFWMFVWDAMQDLTLIILLLCALVSIGVGIPTEGWPKGVYDGVGIAISILLVVFVTSVSDYKQSLQFKDLENEKKNVTIQVTRDGNRQKISVYELVVGDIVHLSIGDIVPADGLFTSGYSLLIDESSLSGESEAVHVDQNTPFLLAGTKVQDGSAKMLVTSVGMRTEWGRLMDTLNEGGDDETPLQVKLNGVATIIGKIGLGFALVTFLVLTGRFLVHKIVLHEITQWSLHDASELLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVQKVWICGQTKEIKSNNSELKSSISEQIFDLFLQSIFQNTSSEVVKGENGKNKVIGTPTEKALLEFGLLAGGDSNVYNDKYKILTIEPFNSNRKRMSVLVTLPGAANRSRAFCKGASEIVLEICDKLVDTNGKVVRIFEEQRKNIEKVIDVFASEALRTLSIAFKDVENSKGDKIPEENFTLLAIVGIKDPVRPGVKEAVETCKAAGISVKMVTGDNIITAKAIARECGILTDGIAIEGSEFRKKTQQEMEEIIPKIQVMARSLPLDKHTLVTHLRKDFEEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKENADVIVMDDNFTTILNVIRWGRSVYVNVQKFVQFQLTVNVVALILNFVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGRNVRLITGIMWRNIIGQSLYQLAVLLVLKFRGRQILKLNGPDATSVLNTFIFNIFVFCQVFNEINSRDMEKINVFRGMFSSWIFLGVLGSTICFQAILVEFLGTFAQTVPLNWDLWLASVLIGAVSLPLAAIFKCIPLPTMDGFADLHRRYHHHHDYVPLRSGPEMA 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02446 1039 SUPERFAMILY Calcium ATPase, transduction domain A 234 331 IPR008250 -
Accr1g02446 1039 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Accr1g02446 1039 PRINTS P-type cation-transporting ATPase superfamily signature 647 658 - -
Accr1g02446 1039 PRINTS P-type cation-transporting ATPase superfamily signature 749 768 - -
Accr1g02446 1039 PRINTS P-type cation-transporting ATPase superfamily signature 773 785 - -
Accr1g02446 1039 PRINTS P-type cation-transporting ATPase superfamily signature 669 679 - -
Accr1g02446 1039 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Accr1g02446 1039 Gene3D - 460 654 IPR023299 GO:0000166
Accr1g02446 1039 Pfam E1-E2 ATPase 235 428 - -
Accr1g02446 1039 SFLD p-type atpase 432 801 IPR044492 -
Accr1g02446 1039 PANTHER CATION TRANSPORTING ATPASE 83 1010 - -
Accr1g02446 1039 Gene3D - 165 1007 - -
Accr1g02446 1039 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Accr1g02446 1039 PRINTS H+-transporting ATPase (proton pump) signature 781 806 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr1g02446 1039 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr1g02446 1039 PRINTS H+-transporting ATPase (proton pump) signature 749 765 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr1g02446 1039 CDD P-type_ATPase_Ca_PMCA-like 139 882 - -
Accr1g02446 1039 Pfam Cation transporter/ATPase, N-terminus 119 182 IPR004014 -
Accr1g02446 1039 Gene3D - 447 794 IPR023214 -
Accr1g02446 1039 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 659 IPR023299 GO:0000166
Accr1g02446 1039 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 1009 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Accr1g02446 1039 NCBIfam HAD-IC family P-type ATPase 714 837 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr1g02446 1039 NCBIfam HAD-IC family P-type ATPase 545 695 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr1g02446 1039 NCBIfam HAD-IC family P-type ATPase 202 498 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr1g02446 1039 Gene3D - 16 77 - -
Accr1g02446 1039 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Accr1g02446 1039 FunFam Calcium-transporting ATPase 16 76 - -
Accr1g02446 1039 SMART Cation_ATPase_N_a_2 120 187 IPR004014 -
Accr1g02446 1039 FunFam Calcium-transporting ATPase 648 794 - -
Accr1g02446 1039 FunFam Calcium-transporting ATPase 460 654 - -
Accr1g02446 1039 SFLD Haloacid Dehalogenase 432 801 - -
Accr1g02446 1039 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1010 IPR023298 -
Accr1g02446 1039 Pfam haloacid dehalogenase-like hydrolase 448 763 - -
Accr1g02446 1039 FunFam Calcium-transporting ATPase 211 333 - -
Accr1g02446 1039 FunFam Calcium-transporting ATPase 766 1012 - -
Accr1g02446 1039 Pfam Cation transporting ATPase, C-terminus 834 1007 IPR006068 -
Accr1g02446 1039 SUPERFAMILY HAD-like 448 854 IPR036412 -
Accr1g02446 1039 Gene3D - 133 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02446 Accr-Chr1 60187095 60202222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02446 57 1036 Primary Pumps ATPases AT3G57330 66.667 0.0 1343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02446 K01537 - gmx:100801260 1565.82